BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0119800 Os02g0119800|AK068133
         (389 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13560.1  | chr1:4638834-4641691 REVERSE LENGTH=390            623   e-179
AT3G25585.2  | chr3:9295856-9298271 FORWARD LENGTH=390            616   e-177

>AT1G13560.1 | chr1:4638834-4641691 REVERSE LENGTH=390
          Length = 389

 Score =  623 bits (1606), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 291/389 (74%), Positives = 335/389 (86%)

Query: 1   MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT 60
           MGY+G HGVA L RYKYSGVDHS +AKY+LQPFW+RFV +FPLW PPNMITL GFMFL+T
Sbjct: 1   MGYIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMPPNMITLMGFMFLVT 60

Query: 61  SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120
           S+ LG+ YSP LD+ PPRWVH AHG+LLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD
Sbjct: 61  SSLLGYIYSPQLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120

Query: 121 ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI 180
           ALACAFEA+AFGSTAMCG+ TFW+W I+A+PFY ATWEH+FTNTLILP++NGPTEGL LI
Sbjct: 121 ALACAFEAMAFGSTAMCGRDTFWFWVISAIPFYGATWEHYFTNTLILPVINGPTEGLALI 180

Query: 181 YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPLVPEVPVYGIALFLMIAFAVIPTIGSNIHN 240
           ++ HFFT   GAEWWAQ   +SIPL +WVP V E+      L++MIAFAVIPT+  N+ N
Sbjct: 181 FVSHFFTAIVGAEWWAQQLGQSIPLFSWVPFVNEIQTSRAVLYMMIAFAVIPTVAFNVTN 240

Query: 241 VYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGFLV 300
           VYKVV +R GSM+LALAML+PF +LL GVL+W YLSP +++   PHL+V+GTG AFGFLV
Sbjct: 241 VYKVVRSRNGSMVLALAMLYPFVVLLGGVLIWDYLSPINLIATYPHLVVLGTGLAFGFLV 300

Query: 301 GRMILAHLCDEPKGLKTGMCMSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVA 360
           GRMILAHLCDEPKGLKT MCMSL Y PFA+ANALTARL+ G PLVDE  VLL YC+FTV+
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNAGVPLVDELWVLLGYCIFTVS 360

Query: 361 LYMHFATSVIHEITNALGIHCFRITRKKA 389
           LY+HFATSVIHEIT ALGI+CFRITRK+A
Sbjct: 361 LYLHFATSVIHEITEALGIYCFRITRKEA 389



>AT3G25585.2 | chr3:9295856-9298271 FORWARD LENGTH=390
          Length = 389

 Score =  616 bits (1588), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 293/389 (75%), Positives = 332/389 (85%)

Query: 1   MGYVGQHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNLFPLWFPPNMITLTGFMFLLT 60
           MGY+G HGVA L+++KYSGVDHS +AKY+LQPFW+RFV +FPLW PPNMITL GFMFLLT
Sbjct: 1   MGYIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLMGFMFLLT 60

Query: 61  SAFLGFFYSPHLDTAPPRWVHLAHGMLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120
           SA LG+ YSP LD+ PPRWVH AHG+LLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD
Sbjct: 61  SALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCD 120

Query: 121 ALACAFEALAFGSTAMCGKATFWYWFIAAVPFYCATWEHFFTNTLILPIVNGPTEGLMLI 180
           AL CA E +A+GSTAMCG+ TFW+W I+AVPF+ ATWEH+FTNTL LP+VNGPTEGL LI
Sbjct: 121 ALGCALETMAYGSTAMCGRDTFWFWVISAVPFFGATWEHYFTNTLTLPVVNGPTEGLALI 180

Query: 181 YLCHFFTFFTGAEWWAQDFRKSIPLLNWVPLVPEVPVYGIALFLMIAFAVIPTIGSNIHN 240
           Y  HFFT   GAEWWAQ F KSIPL +WVP + E+ +  I LF MI FAVIPT+  N  N
Sbjct: 181 YCGHFFTAIVGAEWWAQPFGKSIPLFSWVPFLNEMQMSRIILFSMIFFAVIPTLAINTSN 240

Query: 241 VYKVVEARKGSMLLALAMLFPFGLLLAGVLVWSYLSPSDIMRNQPHLLVIGTGFAFGFLV 300
           VYKVV +R GSMLLALAML+P   L+AGVL+W YLSP D++RN PHL+V+GTG AFGFLV
Sbjct: 241 VYKVVHSRNGSMLLALAMLYPLVTLIAGVLIWDYLSPIDLIRNYPHLVVLGTGLAFGFLV 300

Query: 301 GRMILAHLCDEPKGLKTGMCMSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVA 360
           GRMILAHLCDEPKGLKT MCMSL Y PFA+ANALTARL+DG PLVDE  VLL YC+FT++
Sbjct: 301 GRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNDGVPLVDEFWVLLGYCIFTLS 360

Query: 361 LYMHFATSVIHEITNALGIHCFRITRKKA 389
           LY HFATSVIHEIT ALGI+CFRITRK+A
Sbjct: 361 LYAHFATSVIHEITTALGIYCFRITRKEA 389



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.331    0.144    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,792,740
Number of extensions: 376789
Number of successful extensions: 809
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 809
Number of HSP's successfully gapped: 2
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 113 (48.1 bits)