BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0972200 Os01g0972200|AY302058
         (352 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0972200  Similar to Zinc transporter 2 precursor (ZRT/I...   605   e-173
Os03g0411800  Similar to Metal transport protein                  323   1e-88
Os08g0533900                                                      246   3e-65

>Os01g0972200 Similar to Zinc transporter 2 precursor (ZRT/IRT-like protein 2)
          Length = 352

 Score =  605 bits (1559), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 304/352 (86%), Positives = 304/352 (86%)

Query: 1   MARTMTMRXXXXXXXXXXXXXXXFQACSGHGGINDGDGQVDAPATPASSSGVRSKGLIAV 60
           MARTMTMR               FQACSGHGGINDGDGQVDAPATPASSSGVRSKGLIAV
Sbjct: 1   MARTMTMRVSSLLVAVVLLAALSFQACSGHGGINDGDGQVDAPATPASSSGVRSKGLIAV 60

Query: 61  KVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT 120
           KVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT
Sbjct: 61  KVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT 120

Query: 121 TNQYPFSFMLTCVGFLLTMLSDLVIXXXXXXXXXXXXXDNQVSEXXXXXXAEGAVMSRKE 180
           TNQYPFSFMLTCVGFLLTMLSDLVI             DNQVSE      AEGAVMSRKE
Sbjct: 121 TNQYPFSFMLTCVGFLLTMLSDLVIAAVARRSAAAGVSDNQVSEQQQRQQAEGAVMSRKE 180

Query: 181 EEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKI 240
           EEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKI
Sbjct: 181 EEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKI 240

Query: 241 FAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISM 300
           FAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISM
Sbjct: 241 FAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISM 300

Query: 301 GLATGVFIYVAINHLIAKGYRPHHPTAADKPLFKFXXXXXXXXXXXXXXIWD 352
           GLATGVFIYVAINHLIAKGYRPHHPTAADKPLFKF              IWD
Sbjct: 301 GLATGVFIYVAINHLIAKGYRPHHPTAADKPLFKFLAVLLGVAVMAVVMIWD 352



>Os03g0411800 Similar to Metal transport protein
          Length = 358

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/311 (53%), Positives = 206/311 (66%), Gaps = 14/311 (4%)

Query: 52  VRSKGLIAVKVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLAD 111
           +R++GL+A K+WCL ++   T AGGVSPYF RWN++FL LGTQFA GVFLGTA+MHFLAD
Sbjct: 51  LRARGLVAAKLWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLAD 110

Query: 112 STSTFKGLTTNQ-YPFSFMLTCVGFLLTMLSDLVIXXXXX---------XXXXXXXXDNQ 161
           +  TF  L     YPF+FML C G++LTML+D  I                      + +
Sbjct: 111 ANETFADLLPGTAYPFAFMLACAGYVLTMLADCAISFVVARGGGRTEPAAAAGAGLEEGK 170

Query: 162 VSEXXXXXXAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGV 221
           +S          A  +  ++ + A    +ML   S+  D+VLLI ALCFHSVFEGIAIGV
Sbjct: 171 LSSTNGNASDPPAADAAAQDHSVA----SMLRNASTLGDSVLLIAALCFHSVFEGIAIGV 226

Query: 222 SASKSEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGI 281
           + +K++AW+ LWTI LHKIFAA+AMGIALLRM+P RPFL    Y+ AFAVSSPVGVGIGI
Sbjct: 227 AETKADAWKALWTISLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPVGVGIGI 286

Query: 282 AIDATSQGRAADWTYAISMGLATGVFIYVAINHLIAKGYRPHHPTAADKPLFKFXXXXXX 341
            IDAT+QGR ADW +A+SMGLATG+FIYV+INHL++KGY P  P AAD P  +       
Sbjct: 287 VIDATTQGRVADWIFAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRLLAVVLG 346

Query: 342 XXXXXXXXIWD 352
                   IWD
Sbjct: 347 VAVIAVVMIWD 357



>Os08g0533900 
          Length = 172

 Score =  246 bits (627), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/195 (69%), Positives = 135/195 (69%), Gaps = 25/195 (12%)

Query: 1   MARTMTMRXXXXXXXXXXXXXXXFQACSGHGGINDGDGQVDAPATPASSSGVRSKGLIAV 60
           MARTMTMR               FQACSGHGGINDGDGQVDAPATPASSSGV SKGLIAV
Sbjct: 1   MARTMTMRVSSLLVAVLLLAALSFQACSGHGGINDGDGQVDAPATPASSSGVWSKGLIAV 60

Query: 61  KVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT 120
           K                         SFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT
Sbjct: 61  K-------------------------SFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLT 95

Query: 121 TNQYPFSFMLTCVGFLLTMLSDLVIXXXXXXXXXXXXXDNQVSEXXXXXXAEGAVMSRKE 180
           TNQYPFSFMLTCVGFLLTMLSDLVI             DNQVSE      AEGAVMSRKE
Sbjct: 96  TNQYPFSFMLTCVGFLLTMLSDLVIAAVARRSAAAGVSDNQVSEQQQRQQAEGAVMSRKE 155

Query: 181 EEAAAVAHPAMLVRT 195
           EEAAAVAHPAMLVRT
Sbjct: 156 EEAAAVAHPAMLVRT 170



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.326    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,619,249
Number of extensions: 363649
Number of successful extensions: 1429
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1428
Number of HSP's successfully gapped: 3
Length of query: 352
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 250
Effective length of database: 11,709,973
Effective search space: 2927493250
Effective search space used: 2927493250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 156 (64.7 bits)