BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0953600 Os01g0953600|AK100697
         (197 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0953600  NADPH-dependent FMN reductase family protein        360   e-100
Os01g0954000  NADPH-dependent FMN reductase family protein        254   4e-68

>Os01g0953600 NADPH-dependent FMN reductase family protein
          Length = 197

 Score =  360 bits (923), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/197 (89%), Positives = 177/197 (89%)

Query: 1   MEXXXXXXXXXXXXXCGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDL 60
           ME             CGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDL
Sbjct: 1   MEAAAARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDL 60

Query: 61  ETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAI 120
           ETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAI
Sbjct: 61  ETADGGFPPAVEAFRDKVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAI 120

Query: 121 VSAXXXXXXXRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIK 180
           VSA       RSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIK
Sbjct: 121 VSAGGGFGGGRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIK 180

Query: 181 QVLLSLQAFTLRLQKKD 197
           QVLLSLQAFTLRLQKKD
Sbjct: 181 QVLLSLQAFTLRLQKKD 197



>Os01g0954000 NADPH-dependent FMN reductase family protein
          Length = 203

 Score =  254 bits (648), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 126/180 (70%), Positives = 143/180 (79%), Gaps = 1/180 (0%)

Query: 17  GSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDLETADGGFPPAVEAFRD 76
           GSLR+ S N GL+RAA  +CEESIPG+ +DHVDI  LPLLNTD+E  D GFPPAVEAFR 
Sbjct: 17  GSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDMEV-DDGFPPAVEAFRA 75

Query: 77  KVRQADCFLFGSPEYNYSIATPLKNALDWASRGQNCWADKPAAIVSAXXXXXXXRSQYHL 136
            VR ADCFLF SPEYNYSI+ PLKNALDW SR  NCWAD+ AAIVSA       RS YH+
Sbjct: 76  SVRAADCFLFASPEYNYSISGPLKNALDWGSRPPNCWADRAAAIVSASGGSGGSRSMYHI 135

Query: 137 RQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIKQVLLSLQAFTLRLQKK 196
           RQVGVFLD+HFINKPE+ +KA + P KFDSDGNLID +I+E +K +LLSLQAF LRLQ K
Sbjct: 136 RQVGVFLDIHFINKPEVFIKAHQPPKKFDSDGNLIDPEIKEELKDMLLSLQAFALRLQGK 195



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,235,273
Number of extensions: 248118
Number of successful extensions: 430
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 429
Number of HSP's successfully gapped: 2
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)