Os01g0954000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NADPH-dependent FMN reductase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0954000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NADPH-dependent FMN reductase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.66 | 0.59 | 10.7 | -0.551 | 6.17 | 4.63 | 2.58 | 6.1 | -0.0908 | 6.46 | 24.66 | 694 | 6.25 | 13.8 |
| 172.18 | 0.611 | 10.6 | 0.00903 | 6.31 | 3.15 | 1.54 | -- | 0.0269 | 6.39 | 27.32 | 670 | 6.35 | 13 |
| 173.24 | 0.613 | 10.7 | -0.415 | 6.17 | 4.77 | -- | 5.63 | -0.0826 | 6.45 | 24.46 | 704 | 6.2 | 13.8 |
| 176.41 | 0.619 | 10.6 | 0.0376 | 6.4 | 3.49 | -- | -- | 0.0803 | 6.47 | 27.6 | 611 | 7.35 | 11.9 |
| 1187.99 | 1.61 | 10.5 | -2.86 | -- | 3.75 | -- | 1.82 | 0.335 | -- | 33.65 | 351 | 19.4 | 16 |
| 263.49 | 0.761 | 10.7 | -0.77 | 5.97 | -- | 2.54 | -- | -0.431 | 6.54 | -- | -- | -- | -- |
| 279.6 | 0.783 | 10.7 | -0.734 | 5.99 | -- | -- | -- | -0.44 | 6.52 | -- | -- | -- | -- |
| 403.78 | 0.936 | 10.9 | -0.737 | -- | 6.13 | -- | -- | 0.156 | -- | 51.76 | 359 | 20.4 | 14.9 |
| 174.21 | 0.615 | 10.6 | -- | 6.46 | 3.53 | -- | -- | 0.061 | 6.48 | 27.79 | 565 | 8 | 11.2 |
| 2144.17 | 2.16 | 10.8 | -0.586 | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
| 293.8 | 0.802 | 10.7 | -- | 5.98 | -- | -- | -- | -0.358 | 6.53 | -- | -- | -- | -- |
| 265.01 | 0.758 | 10.8 | -- | -- | 7.02 | -- | -- | -0.2 | -- | 79.59 | 599 | 19 | 12.8 |
| 2153.22 | 2.17 | 10.8 | -- | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 7 | 164.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 11 | 165.12 | temperature | 25 | 720 | < th | dose dependent | sin | 23 | NA |
| 19 | 168.68 | temperature | 25 | 270 | < th | dose dependent | sin | 20 | NA |
| 34 | 171.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 39 | 172.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 51 | 173.61 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 11 |
| 68 | 175.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 81 | 175.83 | temperature | 25 | 10 | < th | dose dependent | sin | 18 | NA |
| 88 | 176.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 109 | 176.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 117 | 176.92 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 10 |
| 125 | 177.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 3 |
| 143 | 177.60 | temperature | 25 | 720 | < th | dose independent | rect. | 2 | 17 |
| 152 | 177.91 | temperature | 25 | 720 | < th | dose independent | sin | 1 | NA |
| 176 | 178.50 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 183 | 178.71 | temperature | 25 | 720 | > th | dose independent | sin | 1 | NA |
| 242 | 179.74 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 396 | 181.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 12 |
| 399 | 181.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 10 |
| 403 | 181.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 431 | 181.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 643 | 183.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 670 | 183.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 688 | 183.74 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 3 |
| 694 | 183.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 719 | 183.97 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 836 | 184.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 862 | 184.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 922 | 185.17 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 943 | 185.26 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |