Os01g0953600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NADPH-dependent FMN reductase family protein.
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Os01g0953600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NADPH-dependent FMN reductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.75 | 0.314 | 10.4 | -0.0656 | 0.273 | -0.399 | 0.988 | -0.723 | 0.0787 | 6.07 | 70.26 | 4004 | -- | -- |
| 45.45 | 0.314 | 10.4 | -0.0814 | 0.285 | -0.45 | 1.1 | -- | 0.064 | 5.88 | 71.03 | 4060 | -- | -- |
| 47.13 | 0.32 | 10.4 | -0.061 | 0.278 | -0.409 | -- | -0.667 | 0.0728 | 6.18 | 70.31 | 4030 | -- | -- |
| 47.57 | 0.321 | 10.4 | -0.0997 | 0.29 | -0.488 | -- | -- | 0.0298 | 6.33 | 71 | 3987 | -- | -- |
| 50.89 | 0.332 | 10.4 | -0.0464 | -- | -0.402 | -- | -0.713 | 0.0792 | -- | 70.15 | 4142 | -- | -- |
| 48.86 | 0.328 | 10.3 | -0.0994 | 0.27 | -- | 0.995 | -- | 0.121 | 5.51 | -- | -- | -- | -- |
| 51.31 | 0.335 | 10.3 | -0.0958 | 0.276 | -- | -- | -- | 0.116 | 5.49 | -- | -- | -- | -- |
| 51.44 | 0.334 | 10.4 | -0.0904 | -- | -0.489 | -- | -- | 0.0364 | -- | 72 | 4182 | -- | -- |
| 47.84 | 0.322 | 10.4 | -- | 0.285 | -0.487 | -- | -- | 0.0426 | 6.34 | 71.19 | 3987 | -- | -- |
| 55.28 | 0.347 | 10.4 | -0.0867 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 51.55 | 0.336 | 10.3 | -- | 0.275 | -- | -- | -- | 0.127 | 5.51 | -- | -- | -- | -- |
| 51.65 | 0.335 | 10.4 | -- | -- | -0.489 | -- | -- | 0.0447 | -- | 71.74 | 4182 | -- | -- |
| 55.48 | 0.348 | 10.3 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 5 | 42.67 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 10 | 42.79 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 9 |
| 27 | 43.19 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 39 | 43.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 52 | 43.44 | humidity | 90.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 58 | 43.48 | humidity | 80.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 78 | 43.64 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 83 | 43.66 | temperature | 25.0 | 720 | < th | dose independent | sin | 13 | NA |
| 99 | 43.80 | humidity | 90.0 | 720 | > th | dose independent | rect. | 17 | 11 |
| 102 | 43.81 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 104 | 43.82 | humidity | 90.0 | 720 | > th | dose independent | sin | 15 | NA |
| 115 | 43.89 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 122 | 43.94 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 7 |
| 124 | 43.94 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 131 | 43.96 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 137 | 43.99 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 146 | 44.00 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 16 |
| 147 | 44.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 151 | 44.00 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 154 | 44.01 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 156 | 44.02 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 162 | 44.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 166 | 44.05 | humidity | 90.0 | 720 | > th | dose independent | rect. | 13 | 15 |
| 179 | 44.07 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 13 |
| 211 | 44.14 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 8 |
| 223 | 44.16 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 228 | 44.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 232 | 44.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 242 | 44.20 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 310 | 44.32 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 327 | 44.35 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 350 | 44.39 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 435 | 44.51 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 542 | 44.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 545 | 44.63 | temperature | 25.0 | 720 | > th | dose independent | sin | 12 | NA |
| 546 | 44.63 | humidity | 70.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 549 | 44.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 550 | 44.63 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 566 | 44.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 568 | 44.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 569 | 44.64 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 585 | 44.65 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 598 | 44.66 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 609 | 44.67 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 610 | 44.67 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 629 | 44.69 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 634 | 44.69 | temperature | 30.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 652 | 44.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 676 | 44.72 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 9 |
| 678 | 44.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 690 | 44.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 699 | 44.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 744 | 44.76 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 7 |
| 760 | 44.77 | humidity | 90.0 | 720 | < th | dose independent | sin | 11 | NA |
| 761 | 44.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 768 | 44.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 818 | 44.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 848 | 44.82 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 851 | 44.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 853 | 44.83 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 861 | 44.83 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 862 | 44.83 | temperature | 30.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 869 | 44.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 896 | 44.85 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 909 | 44.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 911 | 44.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 972 | 44.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 979 | 44.89 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 4 |