BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0936200 Os01g0936200|AK101890
(194 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0936200 Lipase, class 3 family protein 405 e-114
Os05g0372400 Lipase, class 3 family protein 311 3e-85
Os07g0668700 Lipase, class 3 family protein 233 5e-62
Os11g0655800 Lipase, class 3 family protein 224 3e-59
>Os01g0936200 Lipase, class 3 family protein
Length = 194
Score = 405 bits (1042), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MERRGLLKAALLVCLIVLCSGREIQVIQRHPSTTIYNPKLAKTLVEYASAIYTADLTQLF 60
MERRGLLKAALLVCLIVLCSGREIQVIQRHPSTTIYNPKLAKTLVEYASAIYTADLTQLF
Sbjct: 1 MERRGLLKAALLVCLIVLCSGREIQVIQRHPSTTIYNPKLAKTLVEYASAIYTADLTQLF 60
Query: 61 TWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFASDINAIVVVFRGTQENSIQNWIEDLL 120
TWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFASDINAIVVVFRGTQENSIQNWIEDLL
Sbjct: 61 TWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFASDINAIVVVFRGTQENSIQNWIEDLL 120
Query: 121 WKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVSGIQKTRKLFGDVPIMVTGHSMGGAM 180
WKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVSGIQKTRKLFGDVPIMVTGHSMGGAM
Sbjct: 121 WKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVSGIQKTRKLFGDVPIMVTGHSMGGAM 180
Query: 181 ASFCALDLVVSTAS 194
ASFCALDLVVSTAS
Sbjct: 181 ASFCALDLVVSTAS 194
>Os05g0372400 Lipase, class 3 family protein
Length = 342
Score = 311 bits (796), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 144/191 (75%), Positives = 170/191 (89%), Gaps = 4/191 (2%)
Query: 1 MERRGLLKAALLVCLIVLCSGREIQVIQRHPSTTIYNPKLAKTLVEYASAIYTADLTQLF 60
MERR L+AA+L CL+VLCSGRE++ +H T IYN LA+TL EY SA+YTADLTQLF
Sbjct: 1 MERRRWLQAAVLCCLLVLCSGRELKT--KH--TPIYNSTLARTLAEYTSAVYTADLTQLF 56
Query: 61 TWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFASDINAIVVVFRGTQENSIQNWIEDLL 120
+WTC RC DL EGFE++++IVDV+NCLQAYVG+ASD+NA+VVVFRGTQE SIQNWIEDL
Sbjct: 57 SWTCERCCDLTEGFEVIELIVDVKNCLQAYVGYASDMNAVVVVFRGTQETSIQNWIEDLF 116
Query: 121 WKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVSGIQKTRKLFGDVPIMVTGHSMGGAM 180
WKQLDLDYPGMP+A VH GFYSAYHNTT+RDGVV+GI+KTR+ +G++PIMVTGHSMGGAM
Sbjct: 117 WKQLDLDYPGMPQAKVHSGFYSAYHNTTLRDGVVNGIKKTREAYGNIPIMVTGHSMGGAM 176
Query: 181 ASFCALDLVVS 191
ASFCALDLVV+
Sbjct: 177 ASFCALDLVVN 187
>Os07g0668700 Lipase, class 3 family protein
Length = 346
Score = 233 bits (595), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 21 GREIQVIQRHPSTTIYNPKLAKTLVEYASAIYTADLTQLFTWTCARCGDLIEGFEMMDII 80
GR+I V Q T Y+ LA TLVEYASA+Y DLT L+TWTC+RC DL +GFEM +I
Sbjct: 22 GRDISV-QHSQQTLNYSHTLAMTLVEYASAVYMTDLTALYTWTCSRCNDLTQGFEMKSLI 80
Query: 81 VDVENCLQAYVGFASDINAIVVVFRGTQENSIQNWIEDLLWKQLDLDYPGMPEAMVHRGF 140
VDVENCLQA+VG ++N+I+V RGTQENS+QNWI+DL+WKQLDL YP MP A VH GF
Sbjct: 81 VDVENCLQAFVGVDYNLNSIIVAIRGTQENSMQNWIKDLIWKQLDLSYPNMPNAKVHSGF 140
Query: 141 YSAYHNTTMRDGVVSGIQKTRKLFGDVPIMVTGHSMGGAMASFCALDLVVSTAS 194
+S+Y+NT +R + S + K R+ +GD+ ++VTGHSMGGAMASFCALDL ++ S
Sbjct: 141 FSSYNNTILRLAITSAVHKARQSYGDINVIVTGHSMGGAMASFCALDLAINLGS 194
>Os11g0655800 Lipase, class 3 family protein
Length = 366
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 124/159 (77%)
Query: 36 YNPKLAKTLVEYASAIYTADLTQLFTWTCARCGDLIEGFEMMDIIVDVENCLQAYVGFAS 95
YN LA V+YASA+YT+DLT LF WTC RC +GFEM++IIVDVENCLQA+VG A
Sbjct: 56 YNRTLAHIFVQYASAVYTSDLTSLFAWTCPRCQSDTKGFEMIEIIVDVENCLQAFVGVAP 115
Query: 96 DINAIVVVFRGTQENSIQNWIEDLLWKQLDLDYPGMPEAMVHRGFYSAYHNTTMRDGVVS 155
D +I++ FRGTQE+S+ NWIEDL WKQLD+ YPGMP+AMVH GFY+AY+NTT+R ++
Sbjct: 116 DPQSILIAFRGTQEHSVSNWIEDLFWKQLDVGYPGMPDAMVHHGFYTAYYNTTVRHEILE 175
Query: 156 GIQKTRKLFGDVPIMVTGHSMGGAMASFCALDLVVSTAS 194
++ RK +G +PI V GHSMGGA+ASFCALDL V S
Sbjct: 176 SVRWARKTYGRLPINVVGHSMGGALASFCALDLSVKYGS 214
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,322,284
Number of extensions: 233362
Number of successful extensions: 743
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 743
Number of HSP's successfully gapped: 4
Length of query: 194
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 99
Effective length of database: 12,075,471
Effective search space: 1195471629
Effective search space used: 1195471629
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)