Os07g0668700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0668700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Lipase, class 3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.28 | 0.721 | 8.6 | -3.72 | 4.33 | -1.59 | 3.08 | 5.36 | -1.62 | 7.52 | 9.699 | 1531 | 8.88 | 18.6 |
| 271.76 | 0.768 | 8.59 | -3.23 | 4.28 | -1.57 | 1.9 | -- | -1.52 | 7.45 | 9.644 | 1585 | 8.8 | 18.2 |
| 259.34 | 0.75 | 8.6 | -3.7 | 4.33 | -1.54 | -- | 4.8 | -1.65 | 7.57 | 10.27 | 1502 | 9.17 | 18.8 |
| 282.34 | 0.783 | 8.59 | -3.21 | 4.28 | -1.49 | -- | -- | -1.5 | 7.46 | 9.486 | 1585 | 8.82 | 18.2 |
| 714.41 | 1.25 | 8.66 | -3.18 | -- | -2.73 | -- | -0.0562 | -1.29 | -- | 10.27 | 1502 | 9.17 | 18.8 |
| 300.87 | 0.813 | 8.54 | -3.23 | 4.62 | -- | 1.81 | -- | -1.3 | 7.79 | -- | -- | -- | -- |
| 310.31 | 0.825 | 8.54 | -3.18 | 4.61 | -- | -- | -- | -1.3 | 7.82 | -- | -- | -- | -- |
| 613.35 | 1.16 | 8.69 | -3.38 | -- | -3.21 | -- | -- | -1.43 | -- | 59.49 | 26 | 9.19 | 18.6 |
| 548.75 | 1.09 | 8.58 | -- | 4.16 | -1.76 | -- | -- | -1.47 | 7.54 | 10 | 1549 | 9.78 | 18 |
| 1463.12 | 1.79 | 8.65 | -3.12 | -- | -- | -- | -- | -1.24 | -- | -- | -- | -- | -- |
| 576.65 | 1.12 | 8.46 | -- | 4.59 | -- | -- | -- | -0.95 | 7.86 | -- | -- | -- | -- |
| 665.59 | 1.2 | 8.67 | -- | -- | -3.68 | -- | -- | -1.12 | -- | 169.1 | 218 | 11.1 | 14 |
| 1720.63 | 1.94 | 8.57 | -- | -- | -- | -- | -- | -0.894 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.42 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 10 |
| 3 | 247.06 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 4 |
| 4 | 247.23 | radiation | 10 | 720 | < th | dose independent | rect. | 11 | 8 |
| 6 | 247.84 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 8 |
| 7 | 247.94 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 14 | 248.16 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 15 | 248.16 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 33 | 250.56 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 57 | 251.52 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 16 |
| 67 | 251.71 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 12 |
| 71 | 251.77 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 72 | 251.77 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 94 | 252.67 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 15 |
| 123 | 252.87 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 153 | 253.38 | radiation | 10 | 1440 | < th | dose independent | sin | 16 | NA |
| 155 | 253.43 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 161 | 253.54 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 194 | 253.99 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 237 | 255.21 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 255 | 255.38 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 277 | 255.86 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 5 |
| 308 | 256.21 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 2 |
| 322 | 256.38 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 379 | 257.28 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 19 |
| 384 | 257.44 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 399 | 257.79 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 421 | 257.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 428 | 257.95 | temperature | 20 | 30 | > th | dose independent | rect. | 7 | 21 |
| 443 | 258.11 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 571 | 258.89 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 13 |
| 640 | 259.49 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 651 | 259.59 | radiation | 30 | 720 | < th | dose independent | rect. | 15 | 2 |
| 696 | 260.00 | humidity | 50 | 720 | > th | dose dependent | sin | 17 | NA |
| 704 | 260.06 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 737 | 260.36 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 3 |
| 779 | 260.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 803 | 261.02 | radiation | 10 | 1440 | > th | dose independent | sin | 19 | NA |
| 887 | 261.51 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 1 |
| 927 | 261.79 | temperature | 20 | 10 | > th | dose independent | sin | 12 | NA |
| 960 | 262.00 | radiation | 1 | 1440 | > th | dose dependent | sin | 16 | NA |