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Os05g0372400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipase, class 3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.81 (0.0153) R2 : 0.002
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0309 (0.0323) R2dN8 : 0.00258 R2N8 : 0.002
σ : 0.289
deviance : 38.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.72 0.26 9.81 -0.0794 0.0422 -0.411 0.0141 -0.311 -0.0226 8.6 24.82 164 -- --
30.96 0.259 9.81 -0.0789 0.0483 -0.418 -0.0552 -- -0.0276 9.44 24.69 157 -- --
30.69 0.258 9.81 -0.0817 0.0449 -0.408 -- -0.302 -0.0268 7.52 24.69 156 -- --
30.98 0.259 9.81 -0.0833 0.0455 -0.404 -- -- -0.0213 8.3 24.69 157 -- --
30.79 0.258 9.81 -0.0833 -- -0.399 -- -0.306 -0.0214 -- 24.7 156 -- --
35.1 0.278 9.81 -0.0997 0.22 -- 0.168 -- -0.0458 2.4 -- -- -- --
35.2 0.278 9.81 -0.104 0.221 -- -- -- -0.0469 2.46 -- -- -- --
31.1 0.26 9.81 -0.0845 -- -0.396 -- -- -0.0214 -- 24.7 157 -- --
31.17 0.26 9.81 -- 0.0449 -0.408 -- -- -0.0117 8.64 24.7 157 -- --
38.08 0.288 9.81 -0.0949 -- -- -- -- -0.0414 -- -- -- -- --
35.48 0.279 9.81 -- 0.219 -- -- -- -0.0353 2.45 -- -- -- --
31.28 0.26 9.81 -- -- -0.402 -- -- -0.0121 -- 24.69 163 -- --
38.31 0.289 9.81 -- -- -- -- -- -0.0309 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.93 humidity 90.0 14400 > th dose dependent rect. 1 1
2 30.01 wind 1.0 43200 > th dose independent rect. 3 2
3 30.04 wind 1.0 43200 < th dose independent rect. 3 2
4 30.06 humidity 90.0 14400 > th dose dependent rect. 24 6
8 30.12 radiation 40.0 270 < th dose dependent rect. 4 12
9 30.13 wind 1.0 43200 < th dose dependent rect. 3 2
14 30.22 wind 1.0 43200 < th dose independent rect. 1 4
18 30.26 wind 9.0 43200 < th dose independent rect. 18 1
19 30.26 wind 1.0 43200 > th dose independent rect. 1 4
20 30.26 humidity 90.0 14400 > th dose dependent rect. 4 2
26 30.38 humidity 90.0 14400 > th dose independent rect. 24 5
30 30.39 precipitation 0.1 43200 < th dose independent rect. 23 2
32 30.39 precipitation 0.1 43200 < th dose dependent rect. 23 2
33 30.40 radiation 20.0 720 > th dose independent rect. 11 1
34 30.40 precipitation 0.1 43200 < th dose independent rect. 23 4
36 30.40 wind 9.0 43200 > th dose dependent rect. 18 1
38 30.40 precipitation 0.1 43200 < th dose dependent rect. 23 4
39 30.41 precipitation 0.1 43200 > th dose dependent rect. 24 4
45 30.43 radiation 20.0 270 < th dose independent rect. 4 12
48 30.44 precipitation 0.1 43200 > th dose independent rect. 23 4
51 30.46 precipitation 0.1 43200 > th dose independent rect. 23 2
52 30.46 precipitation 0.1 43200 > th dose dependent rect. 23 2
60 30.51 radiation 20.0 720 > th dose independent rect. 9 3
61 30.52 humidity 90.0 14400 > th dose independent rect. 1 2
67 30.55 wind 9.0 43200 > th dose independent rect. 18 1
70 30.56 precipitation 0.1 43200 > th dose independent rect. 2 1
71 30.56 precipitation 0.1 43200 < th dose independent rect. 2 1
74 30.56 precipitation 0.1 43200 < th dose dependent rect. 2 1
75 30.56 precipitation 0.1 43200 > th dose dependent rect. 1 2
112 30.65 wind 1.0 43200 < th dose independent rect. 15 16
113 30.65 wind 1.0 43200 < th dose dependent rect. 3 8
115 30.66 wind 1.0 43200 > th dose independent rect. 16 15
129 30.70 precipitation 0.1 43200 < th dose independent rect. 24 17
136 30.70 precipitation 0.1 43200 < th dose dependent rect. 24 17
140 30.71 precipitation 0.1 43200 > th dose independent rect. 24 17
149 30.73 humidity 90.0 43200 > th dose dependent rect. 7 3
154 30.74 wind 1.0 43200 > th dose independent rect. 23 8
160 30.75 precipitation 0.1 43200 > th dose independent sin 3 NA
161 30.75 precipitation 0.1 43200 < th dose independent sin 3 NA
165 30.75 precipitation 0.1 43200 < th dose dependent sin 3 NA
166 30.75 precipitation 0.1 43200 > th dose dependent rect. 24 17
178 30.77 precipitation 0.1 43200 > th dose independent rect. 3 14
179 30.77 precipitation 0.1 43200 < th dose independent rect. 3 14
183 30.77 radiation 40.0 90 < th dose dependent rect. 6 12
184 30.77 precipitation 0.1 43200 < th dose dependent rect. 3 14
204 30.79 temperature 25.0 43200 < th dose independent rect. 9 2
208 30.79 wind 1.0 43200 < th dose independent rect. 18 16
213 30.80 temperature 25.0 43200 > th dose independent rect. 9 2
227 30.81 wind 1.0 43200 < th dose independent sin 9 NA
230 30.81 humidity 90.0 14400 > th dose independent rect. 4 2
237 30.81 precipitation 0.1 43200 > th dose dependent sin 3 NA
239 30.81 radiation 1.0 720 > th dose dependent rect. 11 1
267 30.83 precipitation 0.1 43200 < th dose independent rect. 4 1
272 30.83 wind 1.0 43200 > th dose independent rect. 3 7
273 30.83 precipitation 0.1 43200 > th dose independent rect. 3 10
274 30.83 precipitation 0.1 43200 < th dose independent rect. 3 10
282 30.83 radiation 20.0 270 > th dose dependent sin 8 NA
283 30.83 precipitation 0.1 43200 < th dose dependent rect. 4 1
287 30.83 precipitation 0.1 43200 < th dose dependent rect. 3 10
289 30.83 precipitation 0.1 43200 > th dose dependent rect. 3 13
305 30.84 wind 1.0 43200 > th dose independent rect. 18 16
314 30.84 precipitation 0.1 43200 > th dose dependent rect. 3 10
325 30.85 wind 1.0 43200 < th dose independent rect. 21 13
335 30.86 humidity 90.0 43200 > th dose independent rect. 21 2
342 30.86 wind 1.0 43200 > th dose independent rect. 22 12
351 30.86 precipitation 0.1 43200 < th dose independent rect. 10 19
355 30.86 precipitation 0.1 43200 > th dose dependent rect. 4 1
361 30.86 precipitation 0.1 43200 > th dose dependent rect. 24 13
364 30.86 precipitation 0.1 43200 < th dose dependent rect. 10 19
367 30.87 precipitation 0.1 43200 > th dose independent rect. 4 1
380 30.87 precipitation 0.1 43200 < th dose independent rect. 12 17
381 30.87 precipitation 0.1 43200 > th dose independent rect. 11 18
395 30.87 precipitation 0.1 43200 < th dose dependent rect. 12 17
402 30.88 humidity 90.0 14400 < th dose independent rect. 24 1
414 30.88 precipitation 0.1 43200 > th dose independent rect. 13 16
427 30.88 radiation 1.0 4320 < th dose dependent rect. 18 8
466 30.89 temperature 20.0 43200 > th dose dependent rect. 9 1
467 30.89 precipitation 0.1 43200 > th dose dependent rect. 12 2
494 30.90 precipitation 0.1 43200 < th dose independent rect. 19 10
508 30.90 precipitation 0.1 43200 > th dose dependent rect. 13 4
509 30.90 precipitation 0.1 43200 > th dose dependent rect. 11 6
514 30.90 precipitation 0.1 43200 < th dose dependent rect. 19 10
525 30.91 wind 1.0 43200 > th dose independent sin 9 NA
528 30.91 precipitation 0.1 43200 > th dose independent rect. 13 4
529 30.91 precipitation 0.1 43200 < th dose independent rect. 13 4
540 30.91 precipitation 0.1 43200 > th dose independent rect. 19 10
561 30.91 precipitation 0.1 43200 < th dose dependent rect. 13 4
574 30.92 temperature 25.0 14400 > th dose independent rect. 23 4
599 30.92 radiation 1.0 4320 < th dose dependent rect. 18 2
607 30.92 precipitation 0.1 43200 > th dose dependent rect. 7 10
613 30.92 radiation 10.0 270 > th dose dependent rect. 15 22
636 30.93 radiation 40.0 10 < th dose independent rect. 23 23
638 30.93 temperature 30.0 43200 < th dose dependent rect. 9 1
655 30.94 temperature 25.0 43200 > th dose independent sin 1 NA
662 30.94 humidity 90.0 14400 < th dose independent rect. 23 6
681 30.94 temperature 25.0 43200 > th dose independent rect. 7 15
689 30.94 temperature 10.0 43200 > th dose dependent rect. 9 1
703 30.95 temperature 25.0 43200 < th dose independent sin 0 NA
725 30.95 temperature 25.0 43200 > th dose independent rect. 8 13
731 30.95 wind 1.0 43200 > th dose independent rect. 20 14
735 30.95 temperature 25.0 43200 < th dose independent rect. 8 14
761 30.95 radiation 30.0 270 > th dose dependent sin 11 NA
837 30.96 temperature 25.0 43200 > th dose independent rect. 2 18
857 30.96 temperature 25.0 270 > th dose dependent rect. 9 1
878 30.97 temperature 25.0 14400 < th dose independent rect. 24 1
884 30.97 wind 1.0 43200 > th dose independent rect. 1 9
890 30.97 precipitation 0.1 43200 > th dose independent rect. 9 11
891 30.97 precipitation 0.1 43200 < th dose independent rect. 9 11
951 30.97 precipitation 0.1 43200 < th dose dependent rect. 9 11