BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0372400 Os05g0372400|AK068781
(342 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18640.1 | chr5:6213283-6215494 FORWARD LENGTH=358 417 e-117
AT5G18630.1 | chr5:6202965-6205448 FORWARD LENGTH=359 403 e-113
AT2G44810.1 | chr2:18479095-18480168 FORWARD LENGTH=358 75 4e-14
AT2G30550.2 | chr2:13014884-13017005 FORWARD LENGTH=530 68 7e-12
AT1G06800.1 | chr1:2089538-2091443 REVERSE LENGTH=516 65 6e-11
AT1G30370.1 | chr1:10719169-10720758 REVERSE LENGTH=530 62 5e-10
AT4G13550.1 | chr4:7871251-7876160 REVERSE LENGTH=716 62 7e-10
AT1G51440.1 | chr1:19070971-19072554 FORWARD LENGTH=528 61 9e-10
AT1G06250.1 | chr1:1913339-1914850 REVERSE LENGTH=424 60 2e-09
AT3G14360.1 | chr3:4791596-4793534 FORWARD LENGTH=519 59 3e-09
AT4G18550.1 | chr4:10225006-10226862 REVERSE LENGTH=420 59 3e-09
AT1G45201.1 | chr1:17123889-17128462 FORWARD LENGTH=480 59 5e-09
AT1G56630.1 | chr1:21223593-21226943 REVERSE LENGTH=486 58 7e-09
AT5G67050.1 | chr5:26759482-26761165 REVERSE LENGTH=478 58 7e-09
AT1G05800.1 | chr1:1741204-1742619 FORWARD LENGTH=472 56 3e-08
AT4G16820.1 | chr4:9467563-9469116 FORWARD LENGTH=518 55 4e-08
AT2G31690.1 | chr2:13476093-13477547 REVERSE LENGTH=485 55 6e-08
AT2G31100.1 | chr2:13256738-13258174 REVERSE LENGTH=415 54 9e-08
AT5G42930.1 | chr5:17210738-17214152 REVERSE LENGTH=468 54 1e-07
>AT5G18640.1 | chr5:6213283-6215494 FORWARD LENGTH=358
Length = 357
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 247/336 (73%), Gaps = 7/336 (2%)
Query: 1 MERRRWL-QAAXXXXXXXXXSGRELKTKH---TPIYNSTLARTLAEYTSAVYTADLTQLF 56
M ++RW A GR LK K P+YN TLA TL EYTSAVY +DL++LF
Sbjct: 1 MGQKRWFFLLAIFVCLVSSSCGRVLKFKSDDGRPVYNHTLAITLVEYTSAVYMSDLSELF 60
Query: 57 SWTCERCCDLTEGFEVIELIVDVKNCLQAYVGYASDMNAVVVVFRGTQETSIQNWIEDLF 116
+WTCERC LT+GFEVIE+IVDV++CLQAYVG A D+NA+++ FRGTQE SIQNW+ DLF
Sbjct: 61 TWTCERCNGLTKGFEVIEIIVDVEHCLQAYVGVAKDLNAIIIAFRGTQEHSIQNWVSDLF 120
Query: 117 WKQLDLDYPGMPQAKVHSGFYSAYHNTTLRDGVVNGIKKTREAYG-NIPIMVTGHSMGGA 175
WKQLDL+YP MP A VH GFYSAYHNTT+R V++ +K+ +E+YG N+ IMVTGHSMGGA
Sbjct: 121 WKQLDLNYPDMPDAMVHHGFYSAYHNTTVRPAVLDAVKRAKESYGANLNIMVTGHSMGGA 180
Query: 176 MASFCALDLVVNYRLKDVTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLPPY 235
MASFCALDLVVN ++V ++TFGQPR+GNA FAS+F +PN R+ + DIVPHLPPY
Sbjct: 181 MASFCALDLVVNEGEENVQVMTFGQPRVGNAAFASYFNLLVPNTFRIIHDRDIVPHLPPY 240
Query: 236 YHYFPQKTYHHFPREVWVHNVG-LGSLVYSIEQICDDSGEDPTCSRSVSGNSVQDHINYL 294
YH FPQKTYHHFP EVW+ + L ++ +E++CD++GEDPTCSRSV GNS+ DH+ Y
Sbjct: 241 YHLFPQKTYHHFPTEVWLTELSILNIVIRGVEKVCDNTGEDPTCSRSVMGNSISDHLTYF 300
Query: 295 GISMHAEASGSCRIVTGDNKLQY-KMDSDGNIVFSK 329
G+ + E C IV G Y + DS GNI S+
Sbjct: 301 GVELMGETWRQCNIVMGHEMESYSRKDSKGNIFLSR 336
>AT5G18630.1 | chr5:6202965-6205448 FORWARD LENGTH=359
Length = 358
Score = 403 bits (1035), Expect = e-113, Method: Compositional matrix adjust.
Identities = 183/303 (60%), Positives = 234/303 (77%), Gaps = 3/303 (0%)
Query: 30 PIYNSTLARTLAEYTSAVYTADLTQLFSWTCERCCDLTEGFEVIELIVDVKNCLQAYVGY 89
P+YN TLA TL EY SAVY +DLT+LF+WTCERC LT+ FEVIE+I DV++CLQAYVG
Sbjct: 35 PVYNHTLAVTLVEYASAVYESDLTKLFTWTCERCNGLTKDFEVIEVIFDVEHCLQAYVGV 94
Query: 90 ASDMNAVVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQAKVHSGFYSAYHNTTLRDGV 149
A D+NA+++ FRGTQE SIQNW+ DLFWKQLDL+YP MP A VH GFYSAYHNTTLR V
Sbjct: 95 AKDLNAIIIAFRGTQEHSIQNWVSDLFWKQLDLNYPDMPDAMVHHGFYSAYHNTTLRPAV 154
Query: 150 VNGIKKTREAYG-NIPIMVTGHSMGGAMASFCALDLVVNYRLKDVTLITFGQPRIGNAVF 208
++ I + ++ YG NI I+VTGHSMGGAMASFC LDLVVN ++V ++TFGQPR+GNA F
Sbjct: 155 LDAITRVKKVYGANINIIVTGHSMGGAMASFCGLDLVVNEGEENVQVMTFGQPRVGNAAF 214
Query: 209 ASHFKCHLPNAIRVTNAHDIVPHLPPYYHYFPQKTYHHFPREVWVHNVGLGSLV-YSIEQ 267
AS++ +PN R+T+ D+VPHLPPYY++FPQKTYHHFP EVWV + + V + +E+
Sbjct: 215 ASYYSLLVPNTFRITHDRDMVPHLPPYYYHFPQKTYHHFPTEVWVKDFSFSNFVLFGLEK 274
Query: 268 ICDDSGEDPTCSRSVSGNSVQDHINYLGISMHAEASGSCRIVTGDNKLQY-KMDSDGNIV 326
+CD++GEDPTCSRSV GNS+ DH+ Y G+ + E+ C IV + +Y + DS GN+
Sbjct: 275 VCDNTGEDPTCSRSVRGNSISDHLRYFGVELKCESWRQCSIVMNQDMERYSRKDSRGNLF 334
Query: 327 FSK 329
S+
Sbjct: 335 LSR 337
>AT2G44810.1 | chr2:18479095-18480168 FORWARD LENGTH=358
Length = 357
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 96 VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQAK----------VHSGFYSAYHNT-- 143
VV+ FRGT + W+E+L + P P V SGF S Y +
Sbjct: 120 VVISFRGT--ATCLEWLENL--RATLTHLPNGPTGANLNGSNSGPMVESGFLSLYTSGVH 175
Query: 144 TLRDGVVNGIKKTREAYGNIP--IMVTGHSMGGAMASFCALDLVVNY-RLKDVTLITFGQ 200
+LRD V I + ++YG+ P + +TGHS+G A+A+ A D+ + R VT+I+FG
Sbjct: 176 SLRDMVREEIARLLQSYGDEPLSVTITGHSLGAAIATLAAYDIKTTFKRAPMVTVISFGG 235
Query: 201 PRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLP 233
PR+GN F + +R+ N+ D++ +P
Sbjct: 236 PRVGNRCFRKLLEKQGTKVLRIVNSDDVITKVP 268
>AT2G30550.2 | chr2:13014884-13017005 FORWARD LENGTH=530
Length = 529
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 31/168 (18%)
Query: 96 VVVVFRGTQETSIQNWIEDL--FWKQL---DLDYPGMPQAKVHSGFYSAYHNT------- 143
+ + +RGT + WI DL + K + + P P KV SGF Y +
Sbjct: 227 IAIAWRGT--VTKLEWIADLKDYLKPVTENKIRCPD-PAVKVESGFLDLYTDKDTTCKFA 283
Query: 144 --TLRDGVVNGIKKTREAYGN-----IPIMVTGHSMGGAMASFCALDLVVNYRLKD---- 192
+ R+ ++ +K+ E +G+ + I VTGHS+GGA+A A D + RL
Sbjct: 284 RFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD-IAEMRLNRSKKG 342
Query: 193 ----VTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLPPYY 236
VT++T+G PR+GN F + +RV N HD+VP P +
Sbjct: 343 KVIPVTVLTYGGPRVGNVRFRERMEELGVKVMRVVNVHDVVPKSPGLF 390
>AT1G06800.1 | chr1:2089538-2091443 REVERSE LENGTH=516
Length = 515
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 96 VVVVFRGTQETSIQNWIEDL--FWKQLD---LDYPGMPQAKVHSGFYSAYHNT------- 143
+ + +RGT + WI DL F K + P P K SGF Y +
Sbjct: 212 IAIAWRGT--VTRLEWIADLKDFLKPVSGNGFRCPD-PAVKAESGFLDLYTDKDTSCNFS 268
Query: 144 --TLRDGVVNGIKKTREAYGN-----IPIMVTGHSMGGAMASFCALDLV---VNYRLKD- 192
+ R+ V+ +K+ E YG+ + I VTGHS+GGA+A A D+ VN K
Sbjct: 269 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGVNRTRKGK 328
Query: 193 ---VTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLPPYY 236
VT T+G PR+GN F + +RV N HD+V P +
Sbjct: 329 VIPVTAFTYGGPRVGNIRFKERIEKLGVKVLRVVNEHDVVAKSPGLF 375
>AT1G30370.1 | chr1:10719169-10720758 REVERSE LENGTH=530
Length = 529
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 96 VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGM---PQAKVHSGFYSAYHNTT-------- 144
+VV +RGT + W DL D G KV SGF S Y++ +
Sbjct: 239 IVVAWRGT--VTPTEWFMDLRTSMEPFDCEGKHGKTVVKVQSGFLSIYNSKSELTRYNKE 296
Query: 145 -----LRDGVVNGIKKTREAYGNIPIMVTGHSMGGAMASFCALDLV--VNYRLKDVTLIT 197
D V + ++ + + +TGHS+GGA+A A + V ++++I+
Sbjct: 297 SASEQTMDEVKRLVNFFKDRGEEVSLTITGHSLGGALALMNAYEAARDVPALSGNISVIS 356
Query: 198 FGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLP 233
FG PR+GN F +RV N DIVP LP
Sbjct: 357 FGAPRVGNLAFKEKLNSLGVKVLRVVNKQDIVPKLP 392
>AT4G13550.1 | chr4:7871251-7876160 REVERSE LENGTH=716
Length = 715
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 36/168 (21%)
Query: 96 VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMP--------------QAKVHSGFYSAYH 141
VV+ FRGT++T WK L D +P + +VHSGF SAY
Sbjct: 450 VVIAFRGTEQTK---------WKDLQTDLMLVPAGLNPERIGGDFKQEVQVHSGFLSAYD 500
Query: 142 NTTLRDGVVNGIKKT-------REAYGNIPIMVTGHSMGGAMASFCALDLVVNYRLK--- 191
+ +R +++ +K T E + VTGHS+GGA+A+ AL+L + K
Sbjct: 501 SVRIR--IISLLKMTIGYIDDVTEREDKWHVYVTGHSLGGALATLLALELSSSQLAKRGA 558
Query: 192 -DVTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLPPYYHY 238
VT+ FG PR+GN FA + + ++ RV N DI+P +P Y
Sbjct: 559 ITVTMYNFGSPRVGNKQFAEIYNQKVKDSWRVVNHRDIIPTVPRLMGY 606
>AT1G51440.1 | chr1:19070971-19072554 FORWARD LENGTH=528
Length = 527
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 96 VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQAKVHSGFYSAYHNT---------TLR 146
+V+ +RGT + WI DL ++ P K+ GF+ Y + R
Sbjct: 214 IVIAWRGT--VTYLEWIYDLKDILCSANFGDDPSIKIELGFHDLYTKKEDSCKFSSFSAR 271
Query: 147 DGVVNGIKKTREAYG------NIPIMVTGHSMGGAMASFCALDLVV---------NYRLK 191
+ V+ +K+ E YG I VTGHS+G ++A A D+ NY++
Sbjct: 272 EQVLAEVKRLIEYYGTEEEGHKTSITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIP 331
Query: 192 DVTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLP 233
+T+ +F PR+GN F +RV N HD VP +P
Sbjct: 332 -ITVFSFSGPRVGNLRFKERCDELGVKVLRVVNVHDKVPSVP 372
>AT1G06250.1 | chr1:1913339-1914850 REVERSE LENGTH=424
Length = 423
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 50/196 (25%)
Query: 79 VKNCLQAYVGYASDMNA-------VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMP--- 128
V+ Y+ A+D +VV +RGT ++ W D D+P P
Sbjct: 110 VQTNWMGYIAVATDQGKAMLGRRDIVVAWRGT--------LQPYEWAN-DFDFPLEPAIS 160
Query: 129 ---------QAKVHSGFY---------SAYHNTTLRDGVVNGIKKTREAYGN--IPIMVT 168
++ SG+ S Y T+ ++ V +K+ E Y + I I T
Sbjct: 161 VFPVTDPKDNPRIGSGWLDIYTASDSRSPYDTTSAQEQVQGELKRLLELYKDEEISITFT 220
Query: 169 GHSMGGAMASFCALDLV--------VNYRLKDV--TLITFGQPRIGNAVFASHFKCHLP- 217
GHS+G M+ A DLV +N + K V T+ FG PRIG+ F + P
Sbjct: 221 GHSLGAVMSVLSAADLVYGKKNNININLQKKQVPITVFAFGSPRIGDHNFKNVVDSLQPL 280
Query: 218 NAIRVTNAHDIVPHLP 233
N +R+ N D+ PH P
Sbjct: 281 NILRIVNVPDVAPHYP 296
>AT3G14360.1 | chr3:4791596-4793534 FORWARD LENGTH=519
Length = 518
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 81/201 (40%), Gaps = 54/201 (26%)
Query: 91 SDMNAVVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQ-AKVHSGF------------- 136
D N +V+ FRGT+ +W D D + +P K+H GF
Sbjct: 230 KDANLIVISFRGTEPFDADDWGTDF-----DYSWYEVPNVGKLHMGFLEAMGLGNRDDTT 284
Query: 137 ---YSAYHNTT---------LRDGVVNG--------IKKTREAYGNIPIMVTGHSMGGAM 176
Y+ + T+ L D V +K+ + N +VTGHS+GGA+
Sbjct: 285 TFHYNLFEQTSSEEENSKKNLLDMVERSAYYAVRVILKRLLSEHENARFVVTGHSLGGAL 344
Query: 177 ASFCALDLVVNYRLKDVTLI----TFGQPRIGNAVFASHFKCHLPNAI----RVTNAHDI 228
A LV+N + + + TFGQPRIGN K L + RV +DI
Sbjct: 345 AILFPTLLVLNEETEIMKRLLGVYTFGQPRIGNREVGLFMKAQLNQPVDRYFRVVYCNDI 404
Query: 229 VPHLPPYYHYFPQKT--YHHF 247
VP LP + KT Y HF
Sbjct: 405 VPRLP-----YDDKTFLYKHF 420
>AT4G18550.1 | chr4:10225006-10226862 REVERSE LENGTH=420
Length = 419
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 26/163 (15%)
Query: 96 VVVVFRGTQETSIQNWIEDLFW---KQLDLDYPGMPQAKVHSGFYSAYHN---------T 143
+VV +RG+ + W+ED + + + Q ++H G+YS Y + T
Sbjct: 149 IVVSWRGSVQP--LEWVEDFEFGLVNAIKIFGERNDQVQIHQGWYSIYMSQDERSPFTKT 206
Query: 144 TLRDGVVNGIKKTREAYGN--IPIMVTGHSMGGAMASFCALDLVVN--YRLKD------- 192
RD V+ + + E Y + + I + GHS+G A+A+ A D+V N R K
Sbjct: 207 NARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVANGYNRPKSRPDKSCP 266
Query: 193 VTLITFGQPRIGNAVFASHFK-CHLPNAIRVTNAHDIVPHLPP 234
VT F PR+G++ F F +R N D++P PP
Sbjct: 267 VTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDVIPIYPP 309
>AT1G45201.1 | chr1:17123889-17128462 FORWARD LENGTH=480
Length = 479
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 45/198 (22%)
Query: 84 QAYVGYASDMNA--VVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQ-AKVHSGFYSA- 139
QA+V S N +VV FRGT+ +W DL DL + M KVH+GF A
Sbjct: 191 QAFVFKTSSTNPDLIVVSFRGTEPFEAADWCTDL-----DLSWYEMKNVGKVHAGFSRAL 245
Query: 140 -----------------YHNTTLRDGVVNGIKKTREAYGNIPIMVTGHSMGGAMASFCAL 182
Y T+R + + + + + N+ ++TGHS+GGA+A+
Sbjct: 246 GLQKDGWPKENISLLHQYAYYTIRQMLRDKLGRNK----NLKYILTGHSLGGALAALFPA 301
Query: 183 DLVVNY--RLKDVT--LITFGQPRIGNAVFASHFKC----HLPNAIRVTNAHDIVPHLP- 233
L ++ L D + TFGQPR+G+ F K H R +D+VP +P
Sbjct: 302 ILAIHGEDELLDKLEGIYTFGQPRVGDEDFGEFMKGVVKKHGIEYERFVYNNDVVPRVPF 361
Query: 234 ------PYYHYFPQKTYH 245
Y HY P +++
Sbjct: 362 DDKYLFSYKHYGPCNSFN 379
>AT1G56630.1 | chr1:21223593-21226943 REVERSE LENGTH=486
Length = 485
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 111/269 (41%), Gaps = 67/269 (24%)
Query: 21 GRELKT---KHTP---IYNSTLARTLAEYTSAV----YTADLTQLFSWTCERCCDLTEGF 70
GR +K ++ P I S LA + +V + DL +S C D T
Sbjct: 130 GRSIKIGDERYKPLLSIMASKLAYENEHFIRSVLQDHWQMDLLGFYS--CPNDFDQTRST 187
Query: 71 EVIELIVDVKNCLQAYVGYASDMNAVVVVFRGTQETSIQNWIEDLFWKQLDLDYPG-MPQ 129
EVI +I D K+ + N +VV FRGT + +W D LDL + M
Sbjct: 188 EVI-VIRDTKD----------NPNLIVVSFRGTDPFNADDWCTD-----LDLSWHNVMNV 231
Query: 130 AKVHSGFYSAY----------------HNTTLRDGVVNGIKKTREAYGNIP---IMVTGH 170
K+H GF A N T + +++ +E + P +++GH
Sbjct: 232 GKIHGGFMKALGLPKEGWYEEINSDQTQNKTSQLAYYTILRQLKEVFEQNPTSKFILSGH 291
Query: 171 SMGGAMASFCALDLVVN------YRLKDVTLITFGQPRIGNAVFASHFKCHLPNA----I 220
S+GGA+A L+++ RL+ V TFGQPR+G+ F + K L
Sbjct: 292 SLGGALAILFTAVLIMHDEKEMLERLEGVY--TFGQPRVGDEDFGIYMKDKLKEFDVKYK 349
Query: 221 RVTNAHDIVPHLPPYYHYFPQKT--YHHF 247
R +D+VP LP F KT + HF
Sbjct: 350 RYVYCNDMVPRLP-----FDDKTLMFKHF 373
>AT5G67050.1 | chr5:26759482-26761165 REVERSE LENGTH=478
Length = 477
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 32/166 (19%)
Query: 95 AVVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQ-AKVHSGFYSAY---HNTTL-RDGV 149
VVV FRGT+ + ++W D D+ + +P +H GF A +N + ++ +
Sbjct: 204 TVVVAFRGTELFNSEDWCSDF-----DITWFELPNIGNIHGGFMKALGLQNNCSWPKEPL 258
Query: 150 VNGIKKTREAY--------------GNIPIMVTGHSMGGAMASFCALDLVVNYRLKDVTL 195
N +K+ AY N ++TGHS+GGA+A LV+++ + +
Sbjct: 259 SNPDRKSPLAYYSIRDSLKTLIAQNKNTKFVLTGHSLGGALAILFTAVLVIHHETELLER 318
Query: 196 I----TFGQPRIGNAVFASHFKCHLP----NAIRVTNAHDIVPHLP 233
I T+GQPR+G++ F + L R +DIVP LP
Sbjct: 319 IQGVYTYGQPRVGDSKFGEFMEKKLEKYNIKYYRFVYNNDIVPRLP 364
>AT1G05800.1 | chr1:1741204-1742619 FORWARD LENGTH=472
Length = 471
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 85 AYVGYASDMNA-------VVVVFRGT--QETSIQNWIEDLFWKQLDLDYPGMPQAKVHSG 135
YV +SD + ++V FRGT + N L +LD P P KV SG
Sbjct: 181 GYVAVSSDESVKRLGRRDILVTFRGTVTNHEWLANLKSSLTPARLDPHNP-RPDVKVESG 239
Query: 136 FYSAYHN---------TTLRDGVVNGIKKTREAYG--NIPIMVTGHSMGGAMASFCALDL 184
F Y + + R+ +++ I + + I I + GHSMG ++A A D+
Sbjct: 240 FLGLYTSGESESKFGLESCREQLLSEISRLMNKHKGEEISITLAGHSMGSSLAQLLAYDI 299
Query: 185 V---VNYRLKD----VTLITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLPPY 235
+N R + VT+ +F PR+GN F + +R+TN +D + LP +
Sbjct: 300 AELGMNQRRDEKPVPVTVFSFAGPRVGNLGFKKRCEELGVKVLRITNVNDPITKLPGF 357
>AT4G16820.1 | chr4:9467563-9469116 FORWARD LENGTH=518
Length = 517
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 42 EYTSAVYTADLTQLFSWTCERCCDLTEGFEVIELIVDVKNCLQAYVGYASDMNAVVVVFR 101
+ T ++Y +L W + DL + + V C +V+ R
Sbjct: 188 KVTKSLYATSSVRLPKWIDDVAPDLRWMTKQTSWVGYVAVCDDPREIRRMGRREIVIALR 247
Query: 102 GTQETSIQNWIEDLFWKQLDLDYPGMPQA-----KVHSGFYSAY-----HNTTLRDGVVN 151
GT ++ W E+ + + P Q+ KV GF S Y H +L + +V
Sbjct: 248 GT--ATLLEWSENFRPNLVSMPEPKPDQSDPTRPKVECGFNSLYTTGDQHAPSLAESLVG 305
Query: 152 GIKKTREAYG--NIPIMVTGHSMGGAMASFCALDLVVNY-RLKDVTLITFGQPRIGNAVF 208
I + E Y + I VTGHS+G A+A A D+ V + +FG PR+GN F
Sbjct: 306 EISRLVELYAGEELSISVTGHSLGAAIALLAADDIAERVPHAPPVAVFSFGGPRVGNREF 365
Query: 209 ASHFKCHLPNAIRVTNAHDIVPHLP 233
A +RV N+ D+V +P
Sbjct: 366 ADRLDSKGVKVLRVVNSQDVVTKVP 390
>AT2G31690.1 | chr2:13476093-13477547 REVERSE LENGTH=485
Length = 484
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 96 VVVVFRGTQETS--IQNWIEDLFWKQLDLDYPGMPQAKVHSGFYSAYHN---------TT 144
+VV FRGT + N++ L + P + KV SGF S Y + +
Sbjct: 210 IVVTFRGTVTNPEWLANFMSSLTPARFHPHNPRL-DVKVESGFLSLYTSDESESKFGLES 268
Query: 145 LRDGVVNGIKKTREAYG--NIPIMVTGHSMGGAMASFCALDLV---VNYRLKD----VTL 195
R +++ I + Y + I + GHSMG ++A A D+ +N R+ VT+
Sbjct: 269 CRQQLLSEISRLMNKYKGEEMSITLAGHSMGSSLAQLLAYDIAELGLNRRIGKGDIPVTV 328
Query: 196 ITFGQPRIGNAVFASHFKCHLPNAIRVTNAHDIVPHLP 233
+F PR+GN F + +R+TN +D V LP
Sbjct: 329 FSFAGPRVGNLEFKKRCEELGVKVLRITNVNDPVTKLP 366
>AT2G31100.1 | chr2:13256738-13258174 REVERSE LENGTH=415
Length = 414
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 40/207 (19%)
Query: 66 LTEGFEVIELIVDVKNCLQAYVGY---ASD-------MNAVVVVFRGTQETSIQNWIEDL 115
L E F + L + N ++GY A+D +VV +RGT + W D
Sbjct: 94 LPECFIIKSLSREAWNKESNWLGYIAVATDEGKKLLGRRGIVVAWRGT--IQLYEWANDF 151
Query: 116 FW--KQLDLDYPGM---PQAKVHSGFYSAYHNTTLR---------DGVVNGIKKTREAYG 161
+ + + +PG + +V +G+ S Y +T R + V +K+ E Y
Sbjct: 152 DFPLESAVMVFPGANPNDEPRVANGWLSLYTSTDPRSRFDKTSAQEQVQEELKRLLELYK 211
Query: 162 N--IPIMVTGHSMGGAMASFCALDLVVNYRLKD---------VTLITFGQPRIGNAVFAS 210
N + I +TGHS+G M+ A D + N K VT+ FG P+IG+ F
Sbjct: 212 NEDVTITLTGHSLGAVMSILSAADFLHNEWPKITPSLQHSLCVTVFAFGSPQIGDRSFKR 271
Query: 211 HFKC--HLPNAIRVTNAHDIVPHLPPY 235
+ HL + +RVTN D++P P +
Sbjct: 272 LVESLEHL-HILRVTNVPDLIPRYPVF 297
>AT5G42930.1 | chr5:17210738-17214152 REVERSE LENGTH=468
Length = 467
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 78/190 (41%), Gaps = 44/190 (23%)
Query: 90 ASDMNAVVVVFRGTQETSIQNWIEDLFWKQLDLDYPGMPQ-AKVHSGFYSAY-------- 140
++D N ++V FRGT +W D LDL + + K+H GF A
Sbjct: 194 STDPNLIIVSFRGTDPFDADDWCTD-----LDLSWYEVKNVGKIHGGFMKALGLQKEGWP 248
Query: 141 --------HNTTLRDGVVNGIKKTREAYGNIP---IMVTGHSMGGAMASFCALDLVVN-- 187
N T + +E P ++TGHS+GGA+A LV++
Sbjct: 249 KEVNLDETQNATTLYAYYTVRRHLKEILDQNPTSKFILTGHSLGGALAILFTAVLVMHDE 308
Query: 188 ----YRLKDVTLITFGQPRIGNAVFASHFKCHLPNA----IRVTNAHDIVPHLPPYYHYF 239
RL+ V TFGQPR+G+ F + K L R +D+VP LP F
Sbjct: 309 EQMLERLEGV--YTFGQPRVGDEEFGNFMKDSLKKFDVKYERYVYCNDMVPRLP-----F 361
Query: 240 PQKT--YHHF 247
KT + HF
Sbjct: 362 DDKTLMFKHF 371
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,703,799
Number of extensions: 324662
Number of successful extensions: 814
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 796
Number of HSP's successfully gapped: 19
Length of query: 342
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 243
Effective length of database: 8,392,385
Effective search space: 2039349555
Effective search space used: 2039349555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)