BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0917200 Os01g0917200|J013123G07
         (469 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0917200  Conserved hypothetical protein                      875   0.0  
Os08g0528800  Peptidase, trypsin-like serine and cysteine do...   372   e-103

>Os01g0917200 Conserved hypothetical protein
          Length = 469

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/469 (91%), Positives = 427/469 (91%)

Query: 1   NFIYLFRFFITSSILDLTIVGLDPAENETTLQAQQPHYLKTCCKPSLDHGSVVYLLGHTG 60
           NFIYLFRFFITSSILDLTIVGLDPAENETTLQAQQPHYLKTCCKPSLDHGSVVYLLGHTG
Sbjct: 1   NFIYLFRFFITSSILDLTIVGLDPAENETTLQAQQPHYLKTCCKPSLDHGSVVYLLGHTG 60

Query: 61  KKELVIGEGKVVIGTDNLLKLSTDGVTWCPGSAGFDAQGNLAFMICDPMKLAXXXXXXXX 120
           KKELVIGEGKVVIGTDNLLKLSTDGVTWCPGSAGFDAQGNLAFMICDPMKLA        
Sbjct: 61  KKELVIGEGKVVIGTDNLLKLSTDGVTWCPGSAGFDAQGNLAFMICDPMKLASSPTTRSS 120

Query: 121 XXXXXXXXXXKKDHPMQFGVPISVVCDWLYQHWQGNLDEVSKPKLPLVRLMXXXXXXXXX 180
                     KKDHPMQFGVPISVVCDWLYQHWQGNLDEVSKPKLPLVRLM         
Sbjct: 121 STSSSSSHSSKKDHPMQFGVPISVVCDWLYQHWQGNLDEVSKPKLPLVRLMSSRSDHSST 180

Query: 181 XXXXXXVFKPADDENDDTSVSSQVTSKPKHQQASGNSANARISHDANPLVDLRANNEQGV 240
                 VFKPADDENDDTSVSSQVTSKPKHQQASGNSANARISHDANPLVDLRANNEQGV
Sbjct: 181 SFTRRHVFKPADDENDDTSVSSQVTSKPKHQQASGNSANARISHDANPLVDLRANNEQGV 240

Query: 241 STPEIYESPRQSSCQGQKDAGSVQLLDINFPPSAPKTIFLPLPLKQMLSDENNADTSKPR 300
           STPEIYESPRQSSCQGQKDAGSVQLLDINFPPSAPKTIFLPLPLKQMLSDENNADTSKPR
Sbjct: 241 STPEIYESPRQSSCQGQKDAGSVQLLDINFPPSAPKTIFLPLPLKQMLSDENNADTSKPR 300

Query: 301 NQSRDNGFPSGIIWHRNCEALSRDPPVAPLQDDCXXXXXXXXXPVELLEYRNEDHFSSEE 360
           NQSRDNGFPSGIIWHRNCEALSRDPPVAPLQDDC         PVELLEYRNEDHFSSEE
Sbjct: 301 NQSRDNGFPSGIIWHRNCEALSRDPPVAPLQDDCSSEGQSSSSPVELLEYRNEDHFSSEE 360

Query: 361 ETMYSAETMESRNIPSPREKHVGRSQSCVTYRRWSSPRMSTIQNGTLRKQHTLVPVRKSH 420
           ETMYSAETMESRNIPSPREKHVGRSQSCVTYRRWSSPRMSTIQNGTLRKQHTLVPVRKSH
Sbjct: 361 ETMYSAETMESRNIPSPREKHVGRSQSCVTYRRWSSPRMSTIQNGTLRKQHTLVPVRKSH 420

Query: 421 SQNTSLPQRSHDYLSPTVSSAMKKRNSMEQQLPTKPRRSIAQTSPKWMF 469
           SQNTSLPQRSHDYLSPTVSSAMKKRNSMEQQLPTKPRRSIAQTSPKWMF
Sbjct: 421 SQNTSLPQRSHDYLSPTVSSAMKKRNSMEQQLPTKPRRSIAQTSPKWMF 469



>Os08g0528800 Peptidase, trypsin-like serine and cysteine domain containing
           protein
          Length = 538

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/467 (46%), Positives = 267/467 (57%), Gaps = 25/467 (5%)

Query: 7   RFFITSSILDLTIVGLDPAENETTLQAQQPHYLKTCCKPSLDHGSVVYLLGHTGKKELVI 66
           RFFITS ILDLTIVGLD   +E     QQPH+LKTC  PSLD GS V LLGHT +K+L I
Sbjct: 93  RFFITSPILDLTIVGLDVVNDELNSHGQQPHFLKTCLNPSLDLGSTVLLLGHTKRKDLTI 152

Query: 67  GEGKVVIGTDNLLKLSTDGVTWCPGSAGFDAQGNLAFMICDPMKLAXXXXXXXXXXXXXX 126
           GEGKV+I TDNL+K STD V W PGSAGFD  GNLAFM+CDPMKLA              
Sbjct: 153 GEGKVIITTDNLIKFSTDEVAWYPGSAGFDMHGNLAFMVCDPMKLAPSTPTGYASASSAA 212

Query: 127 XXXXKKDHPMQFGVPISVVCDWLYQHWQGNLDEVSKPKLPLVRLMXXXXXXXXXXXXXXX 186
               KKD P QFG+PI  VC WL QHW GNL++VSKP +P  RL+               
Sbjct: 213 LLSAKKDVPTQFGMPIPAVCGWLKQHWNGNLEDVSKPMMPPARLISTGQRSECSSVGRLN 272

Query: 187 VFKPADDENDDTSVSSQVTSKPKHQQASGNSANARISHDANPLVDLRANNEQGVSTPEIY 246
             K  + E  D   SSQ+  +      S +SA+A+IS   N  VD  + +EQ   T +++
Sbjct: 273 YIKTMEREGGDGMSSSQIPPRLTQHHGSCSSASAKISCGENDSVDSHSIHEQQDLTSQMH 332

Query: 247 ESPRQSSCQGQKDAGSVQLLDINFPPSAPKTIFLPLPLKQMLSDENNADTSKPRNQSRDN 306
           ES         K   S  L+D NFPP  P++I LPLPLK M+S EN     KP       
Sbjct: 333 ES---------KIEQSASLMDNNFPPGHPRSIRLPLPLKHMMSHENKI---KPNPSFSHE 380

Query: 307 GFPSGIIWHRNCEALSRDPPVAPLQDDCXXXXXXXXXPVELLEYRNE-DHFSSEEETMYS 365
              + +    NC  L         Q++C         P ++ E  +E   FSS EETMYS
Sbjct: 381 AQLANV--RINCGTLHN----VAYQENCWSEAQSSSSPPDISELGDERGGFSSGEETMYS 434

Query: 366 AETMESRNIPSPREKH---VGRSQSCVTYRRWSSPRMSTIQNGTLRKQHTLVPVRKSHSQ 422
           AET ESRNIPSP+EK+   VGRSQS V + +W SP+      G   K HT +P+RK H Q
Sbjct: 435 AETRESRNIPSPKEKNPKMVGRSQSFVNHSKWDSPKSVESSKGAPSKSHTFIPLRKPHLQ 494

Query: 423 NTSLPQRSHDYLSPTVSSAMKKRNSMEQQLPTKPRRSIAQTSPKWMF 469
             ++ Q+S D+ SPTVSS+MKKRN    Q+P KPR+S AQ + KW+ 
Sbjct: 495 AAAISQKSQDFFSPTVSSSMKKRN--LSQIPMKPRQS-AQVTSKWII 538



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.130    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,961,895
Number of extensions: 666309
Number of successful extensions: 1571
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1565
Number of HSP's successfully gapped: 2
Length of query: 469
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 365
Effective length of database: 11,605,545
Effective search space: 4236023925
Effective search space used: 4236023925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)