Os01g0917200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0917200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 262.47 | 0.761 | 6.42 | -4.15 | 0.697 | 3.47 | 0.624 | 5.01 | -0.841 | 4.16 | 9.955 | 5489 | -- | -- |
| 281.08 | 0.781 | 6.55 | -4.81 | 0.616 | 2.64 | 1.17 | -- | -0.98 | 4.62 | 17.57 | 2577 | -- | -- |
| 263.56 | 0.756 | 6.42 | -4.14 | 0.699 | 3.48 | -- | 5.1 | -0.842 | 4.12 | 9.976 | 5502 | -- | -- |
| 271.65 | 0.768 | 6.56 | -4.63 | 0.67 | 2.4 | -- | -- | -0.985 | 5.26 | 21.83 | 2479 | -- | -- |
| 289.91 | 0.793 | 6.42 | -4.12 | -- | 3.6 | -- | 5.26 | -0.837 | -- | 10.02 | 5502 | -- | -- |
| 450.06 | 0.995 | 6.46 | -3.72 | 0.859 | -- | 0.869 | -- | -0.483 | 3.6 | -- | -- | -- | -- |
| 452.36 | 0.996 | 6.46 | -3.73 | 0.864 | -- | -- | -- | -0.488 | 3.63 | -- | -- | -- | -- |
| 291.29 | 0.795 | 6.58 | -4.61 | -- | 2.39 | -- | -- | -0.981 | -- | 22 | 2647 | -- | -- |
| 758.51 | 1.28 | 6.35 | -- | 0.669 | 1.59 | -- | -- | 0.135 | 3.09 | 31.24 | 1973 | -- | -- |
| 493.9 | 1.04 | 6.46 | -3.7 | -- | -- | -- | -- | -0.465 | -- | -- | -- | -- | -- |
| 819.98 | 1.34 | 6.37 | -- | 0.791 | -- | -- | -- | -0.0725 | 3.66 | -- | -- | -- | -- |
| 777.09 | 1.3 | 6.31 | -- | -- | 1.36 | -- | -- | 0.232 | -- | 30 | 2609 | -- | -- |
| 854.73 | 1.36 | 6.37 | -- | -- | -- | -- | -- | -0.0551 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 252.90 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 253.85 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 253.90 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 6 | 255.64 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 7 | 255.81 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 11 | 256.76 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 12 | 256.78 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 3 | 6 |
| 17 | 257.09 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 22 | 257.30 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 95 | 259.38 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 103 | 259.54 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 105 | 259.57 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 148 | 260.45 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 191 | 261.06 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 194 | 261.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 231 | 261.61 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 232 | 261.62 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 235 | 261.62 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 238 | 261.63 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 253 | 261.67 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 285 | 261.77 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 16 | 14 |
| 289 | 261.84 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 439 | 262.92 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 471 | 263.05 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 477 | 263.10 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 489 | 263.15 | temperature | 30.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 493 | 263.16 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 503 | 263.23 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 509 | 263.29 | temperature | 30.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 525 | 263.37 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 611 | 263.71 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 628 | 263.76 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 629 | 263.76 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 656 | 263.84 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 657 | 263.84 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 684 | 263.91 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 17 | 12 |
| 685 | 263.92 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 727 | 264.00 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 832 | 264.17 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 848 | 264.21 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 942 | 264.40 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 990 | 264.47 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |