BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0915200 Os01g0915200|AK121863
(186 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0915200 Similar to Cystatin 212 1e-55
Os04g0350100 Proteinase inhibitor I25, cystatin domain cont... 80 8e-16
Os01g0915401 Proteinase inhibitor I25, cystatin domain cont... 79 2e-15
>Os01g0915200 Similar to Cystatin
Length = 186
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 126/186 (67%)
Query: 1 IHRSRSLLTNTTKNIVADKNIVHVGCVSMAARCPVGVASVLLLIVLVTVXXXXXXXXXXX 60
IHRSRSLLTNTTKNIVADKNIVHVGCVSMAARCPVGVASVLLLIVLVTV
Sbjct: 1 IHRSRSLLTNTTKNIVADKNIVHVGCVSMAARCPVGVASVLLLIVLVTVASAASGARSGG 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDREVQELGRFSVEEHNXXXXXXDCGDVRLEF 120
DREVQELGRFSVEEHN DCGDVRLEF
Sbjct: 61 GGGGGIRELRGGGAGRRVGGRTEVRDVEGDREVQELGRFSVEEHNRRRRSRDCGDVRLEF 120
Query: 121 GRVVAAQRQVVSGLKYYLRVXXXXXXXXXXXXXXPRVFDAVVVVKPWLESRTLLTFAPAA 180
GRVVAAQRQVVSGLKYYLRV PRVFDAVVVVKPWLESRTLLTFAPAA
Sbjct: 121 GRVVAAQRQVVSGLKYYLRVAAAEEGAAGQNGGEPRVFDAVVVVKPWLESRTLLTFAPAA 180
Query: 181 DSPNES 186
DSPNES
Sbjct: 181 DSPNES 186
>Os04g0350100 Proteinase inhibitor I25, cystatin domain containing protein
Length = 151
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 90 DREVQELGRFSVEEHNXXXXXXDCGD------VRLEFGRVVAAQRQVVSGLKYYLRVXXX 143
++ VQ LGRF+V EHN G V+L F RVV AQ+QVVSG+ YYL+V
Sbjct: 51 NKAVQSLGRFAVAEHNRRLRHGGSGGPADPVPVKLAFARVVEAQKQVVSGVAYYLKVAAS 110
Query: 144 XXX-XXXXXXXXPRVFDAVVVVKPWLESRTLLTFAPAADS 182
RVFDAVVVVK WL+S+ L++F PA+ +
Sbjct: 111 ARDPRGGAAAGGDRVFDAVVVVKAWLKSKELVSFTPASST 150
>Os01g0915401 Proteinase inhibitor I25, cystatin domain containing protein
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 90 DREVQELGRFSVEEHNXXXXXXDCGDVRLEFGRVVAAQRQVVSGLKYYLRVXXXXXXXXX 149
+REVQELG F V EHN G L F RVVAAQ QVVSG+KYYLR+
Sbjct: 61 NREVQELGLFCVVEHNRRGGSATRGR-GLVFSRVVAAQTQVVSGIKYYLRIAAQEADDEL 119
Query: 150 XXXXXPRVFDAVVVVKPWLESRTLLTFAPAADSPN 184
VFDAVVVVK W+ SR +++F PAA+ P
Sbjct: 120 -------VFDAVVVVKAWVPSREMVSFVPAAELPG 147
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,416,601
Number of extensions: 72325
Number of successful extensions: 116
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 4
Length of query: 186
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 91
Effective length of database: 12,075,471
Effective search space: 1098867861
Effective search space used: 1098867861
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 153 (63.5 bits)