Os04g0350100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor I25, cystatin domain containing protein.
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Os04g0350100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor I25, cystatin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 410.14 | 0.952 | 5.43 | -7.94 | 1.41 | 1.18 | -1.41 | -9.73 | -1.75 | 10.2 | 26.2 | 3519 | -- | -- |
| 424.49 | 0.96 | 5.16 | -6.5 | 1.29 | 1.82 | -0.987 | -- | -1.33 | 10.2 | 14.1 | 46301 | -- | -- |
| 416.93 | 0.951 | 5.44 | -7.93 | 1.4 | 1.14 | -- | -9.11 | -1.76 | 10.1 | 26.28 | 3336 | -- | -- |
| 428.13 | 0.964 | 5.16 | -6.57 | 1.31 | 1.83 | -- | -- | -1.32 | 10.1 | 14 | 46297 | -- | -- |
| 530.08 | 1.07 | 5.44 | -7.67 | -- | 0.912 | -- | -9.45 | -1.64 | -- | 26.2 | 4279 | -- | -- |
| 475.55 | 1.02 | 5.06 | -5.02 | 1.28 | -- | -0.988 | -- | -0.891 | 10.2 | -- | -- | -- | -- |
| 479.43 | 1.03 | 5.06 | -5.06 | 1.29 | -- | -- | -- | -0.894 | 10.1 | -- | -- | -- | -- |
| 530.73 | 1.07 | 5.18 | -6.49 | -- | 1.77 | -- | -- | -1.3 | -- | 13.86 | 46293 | -- | -- |
| 655.32 | 1.19 | 4.69 | -- | 1.22 | -3.3 | -- | -- | 0.831 | 8.84 | 22 | 47520 | -- | -- |
| 580.08 | 1.13 | 5.09 | -5.08 | -- | -- | -- | -- | -0.896 | -- | -- | -- | -- | -- |
| 1154.7 | 1.59 | 4.93 | -- | 1.32 | -- | -- | -- | -0.33 | 10.4 | -- | -- | -- | -- |
| 650.87 | 1.19 | 4.83 | -- | -- | -3.37 | -- | -- | 0.225 | -- | 33.68 | 47520 | -- | -- |
| 1260.63 | 1.66 | 4.97 | -- | -- | -- | -- | -- | -0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 383.73 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 384.49 | radiation | 1 | 43200 | > th | dose independent | sin | 7 | NA |
| 3 | 384.50 | radiation | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 6 | 384.62 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 16 | 384.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 17 | 384.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 36 | 384.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 212 | 385.67 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 213 | 386.02 | temperature | 20 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 214 | 386.04 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 273 | 387.00 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 298 | 387.83 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 307 | 387.92 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 313 | 387.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 318 | 388.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 329 | 388.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 333 | 388.16 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 395 | 388.51 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 396 | 388.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 403 | 388.54 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 470 | 388.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 481 | 388.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 485 | 388.68 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 553 | 388.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 575 | 388.80 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 582 | 388.84 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 616 | 389.03 | radiation | 10 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 636 | 389.17 | temperature | 20 | 43200 | > th | dose dependent | sin | 1 | NA |
| 645 | 389.22 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 820 | 389.84 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 839 | 389.90 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 847 | 389.91 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 850 | 389.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 872 | 389.98 | radiation | 1 | 43200 | < th | dose dependent | sin | 8 | NA |
| 878 | 389.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 952 | 390.15 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 980 | 390.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 982 | 390.22 | temperature | 20 | 43200 | > th | dose dependent | no | NA | NA |