BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0849000 Os01g0849000|AK105208
         (118 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0849000  Plant lipid transfer protein/Par allergen fami...   196   4e-51
Os04g0415800  Plant lipid transfer/seed storage/trypsin-alph...   119   3e-28
Os05g0160300  Plant lipid transfer protein/Par allergen fami...   112   5e-26
Os04g0415900  Plant lipid transfer/seed storage/trypsin-alph...   105   6e-24

>Os01g0849000 Plant lipid transfer protein/Par allergen family protein
          Length = 118

 Score =  196 bits (497), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/118 (85%), Positives = 101/118 (85%)

Query: 1   MESKVRCVWFLLXXXXXXXXXXXXXXXXXECGRVPVDQVALKLAPCAAATQNPRAAVPPN 60
           MESKVRCVWFLL                 ECGRVPVDQVALKLAPCAAATQNPRAAVPPN
Sbjct: 1   MESKVRCVWFLLVVAVVVAAGVETVRGAGECGRVPVDQVALKLAPCAAATQNPRAAVPPN 60

Query: 61  CCAQVRSIGRNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP 118
           CCAQVRSIGRNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
Sbjct: 61  CCAQVRSIGRNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP 118



>Os04g0415800 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
           domain containing protein
          Length = 116

 Score =  119 bits (299), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/90 (63%), Positives = 73/90 (81%), Gaps = 1/90 (1%)

Query: 30  ECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR-NPKCLCAVMLSNTARSAG 88
           ECG  P D++ALKLAPCA+A ++P++     CC  V +IG+ +PKCLCAVMLS+T R+AG
Sbjct: 27  ECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQSPKCLCAVMLSSTTRNAG 86

Query: 89  VKPAVAMTIPKRCAIANRPIGYKCGPYTLP 118
           +KP VA+TIPKRC IA+RP+GYKCG YTLP
Sbjct: 87  IKPEVAITIPKRCNIADRPVGYKCGDYTLP 116



>Os05g0160300 Plant lipid transfer protein/Par allergen family protein
          Length = 117

 Score =  112 bits (280), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 72/88 (81%)

Query: 31  CGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARSAGVK 90
           CGR   D+VAL+LAPC +A  +P++A   +CC+ V +IG++P CLCAVMLSNTAR AG+K
Sbjct: 30  CGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIK 89

Query: 91  PAVAMTIPKRCAIANRPIGYKCGPYTLP 118
           P VA+TIPKRC +A+RP+GYKCG YTLP
Sbjct: 90  PEVAITIPKRCNMADRPVGYKCGDYTLP 117



>Os04g0415900 Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor
           domain containing protein
          Length = 123

 Score =  105 bits (263), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%)

Query: 30  ECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIG--RNPKCLCAVMLSNTARSA 87
           +CG+ P ++VALKLAPCA A Q+P A  P  CCA VR IG  ++  CLCAV+LS+T R +
Sbjct: 29  KCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRS 88

Query: 88  GVKPAVAMTIPKRCAIANRPIGYKCGPYTLP 118
           GVKP VA+TIPKRC +ANRP+GYKCG YTLP
Sbjct: 89  GVKPEVAITIPKRCKLANRPVGYKCGAYTLP 119



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.325    0.135    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,557,431
Number of extensions: 112330
Number of successful extensions: 461
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 458
Number of HSP's successfully gapped: 4
Length of query: 118
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 33
Effective length of database: 12,597,611
Effective search space: 415721163
Effective search space used: 415721163
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)