BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0821800 Os01g0821800|AK119168
         (409 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0821800  Endothelial monocyte-activating polypeptide II...   737   0.0  
Os06g0508700  Similar to Scye1-prov protein                       173   2e-43
Os04g0303900  Endothelial monocyte-activating polypeptide II...   114   9e-26

>Os01g0821800 Endothelial monocyte-activating polypeptide II precursor pro-EMAP
           II family protein
          Length = 409

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/393 (92%), Positives = 365/393 (92%)

Query: 17  YALCKHLSLDPNXXXXXXXXXXDIATLFSHIVKSSEDEVLKWVEFSSNFVGKCGEQHALL 76
           YALCKHLSLDPN          DIATLFSHIVKSSEDEVLKWVEFSSNFVGKCGEQHALL
Sbjct: 17  YALCKHLSLDPNTISSTSIEESDIATLFSHIVKSSEDEVLKWVEFSSNFVGKCGEQHALL 76

Query: 77  GNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYIQNIV 136
           GNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYIQNIV
Sbjct: 77  GNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYIQNIV 136

Query: 137 DFGTTVQKVNLTKSVFDPPSHPKKADKGDTDPSSKKVVSGQKNVGKSDANVDSKKAAPEX 196
           DFGTTVQKVNLTKSVFDPPSHPKKADKGDTDPSSKKVVSGQKNVGKSDANVDSKKAAPE 
Sbjct: 137 DFGTTVQKVNLTKSVFDPPSHPKKADKGDTDPSSKKVVSGQKNVGKSDANVDSKKAAPEN 196

Query: 197 XXXXXXXXXXXXXXXXXSGDKKKAQEKSAGKPNEGVADKAPQKTAEKDSECNVSILNIQV 256
                            SGDKKKAQEKSAGKPNEGVADKAPQKTAEKDSECNVSILNIQV
Sbjct: 197 KAPENKANPTPAKNNKPSGDKKKAQEKSAGKPNEGVADKAPQKTAEKDSECNVSILNIQV 256

Query: 257 GLIRKAWKHPSADSLLVEEIDLGDGNVHQVVSGLAKFFSPEELVNRHVVLITNVKPGKLR 316
           GLIRKAWKHPSADSLLVEEIDLGDGNVHQVVSGLAKFFSPEELVNRHVVLITNVKPGKLR
Sbjct: 257 GLIRKAWKHPSADSLLVEEIDLGDGNVHQVVSGLAKFFSPEELVNRHVVLITNVKPGKLR 316

Query: 317 DVMSAGLVLCASNQDHTVVEPLIPPEGAKPGERISFAGFDGKPEDVLNPKKKQLDKITPD 376
           DVMSAGLVLCASNQDHTVVEPLIPPEGAKPGERISFAGFDGKPEDVLNPKKKQLDKITPD
Sbjct: 317 DVMSAGLVLCASNQDHTVVEPLIPPEGAKPGERISFAGFDGKPEDVLNPKKKQLDKITPD 376

Query: 377 LHTDGNGIATYRGVPFTTSAGPCRSSVPNASIK 409
           LHTDGNGIATYRGVPFTTSAGPCRSSVPNASIK
Sbjct: 377 LHTDGNGIATYRGVPFTTSAGPCRSSVPNASIK 409



>Os06g0508700 Similar to Scye1-prov protein
          Length = 798

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 128/196 (65%), Gaps = 11/196 (5%)

Query: 215 GDKKKAQEKSAGKPNEGVADKAPQKTAEKDSECNVSILNIQVGLIRKAWKHPSADSLLVE 274
           G +KK Q+K +G         +  K AE D    V+ L+I+VGLIRKA KHP ADSL VE
Sbjct: 613 GGQKKEQKKQSGG--------SKSKNAEVD--VTVAKLDIRVGLIRKAQKHPDADSLYVE 662

Query: 275 EIDLGDGNVHQVVSGLAKFFSPEELVNRHVVLITNVKPGKLRDVMSAGLVLCASNQDHTV 334
           EID+G+     VVSGL KF   EE+ NR V ++ N+KP  +R + S  +VL ASN+DHT 
Sbjct: 663 EIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTK 722

Query: 335 VEPLIPPEGAKPGERISFAGFDGKPEDVLNPKKKQLDKITPDLHTDGNGIATYRGVPFTT 394
           VE + PPE A  GER++FAG+ G+PE  LN K K  +K++ DLH++G  +A Y+ VPFTT
Sbjct: 723 VELVEPPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTT 782

Query: 395 SAGPCR-SSVPNASIK 409
           SAG C+  S+ +  I+
Sbjct: 783 SAGVCKVKSIASGEIR 798



>Os04g0303900 Endothelial monocyte-activating polypeptide II precursor pro-EMAP
           II family protein
          Length = 259

 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 6/154 (3%)

Query: 250 SILNIQVGLIRKAWKHPSADSLLVEEIDLGDGNVHQVVSGLAKFFSPEELVNRHVVLITN 309
           ++L+I+VG + KAW+HP AD+L VEE+D+G+     + SGL  +   ++L + +V+++ N
Sbjct: 93  ALLDIRVGRVVKAWRHPEADTLYVEEVDVGEEQPRTICSGLVNYLPIDQLQDSNVIVLAN 152

Query: 310 VKPGKLRDVMSAGLVLCASNQDHTVVEPLIPPEGAKPGERISFAGFDGK--PEDVLNP-- 365
           +KP  +R + S G+++ AS+  H  VE L PPEG+ PGER+ F   DGK    +  +P  
Sbjct: 153 LKPRNMRGIKSNGMLMAASDASHENVELLTPPEGSVPGERVWFGTEDGKDRQSEAASPNQ 212

Query: 366 --KKKQLDKITPDLHTDGNGIATYRGVPFTTSAG 397
             KKK  + + P L T  N  A     P  TSAG
Sbjct: 213 VQKKKIWESVQPHLRTSENCTAFLGEHPMRTSAG 246



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.313    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,356,846
Number of extensions: 560047
Number of successful extensions: 1124
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1122
Number of HSP's successfully gapped: 3
Length of query: 409
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 306
Effective length of database: 11,657,759
Effective search space: 3567274254
Effective search space used: 3567274254
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 157 (65.1 bits)