Os04g0303900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Endothelial monocyte-activating polypeptide II precursor pro-EMAP II family protein.
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Os04g0303900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Endothelial monocyte-activating polypeptide II precursor pro-EMAP II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.17 | 0.305 | 13.5 | -1.15 | 0.389 | 0.789 | 0.3 | 0.988 | -0.708 | 23.1 | 22.62 | 30 | -- | -- |
| 42.69 | 0.304 | 13.5 | -1.32 | 0.388 | 0.863 | 0.148 | -- | -0.76 | 23.2 | 21.95 | 56 | -- | -- |
| 42.45 | 0.303 | 13.5 | -1.17 | 0.382 | 0.779 | -- | 0.834 | -0.713 | 23.1 | 23.18 | 34 | -- | -- |
| 42.59 | 0.304 | 13.5 | -1.31 | 0.372 | 0.858 | -- | -- | -0.751 | 23.5 | 23.18 | 60 | -- | -- |
| 48.09 | 0.323 | 13.5 | -1.16 | -- | 0.619 | -- | 0.678 | -0.687 | -- | 22.93 | 276 | -- | -- |
| 54.02 | 0.345 | 13.5 | -1.13 | 0.345 | -- | 0.519 | -- | -0.624 | 19.4 | -- | -- | -- | -- |
| 54.72 | 0.346 | 13.5 | -1.14 | 0.345 | -- | -- | -- | -0.623 | 19.7 | -- | -- | -- | -- |
| 48.24 | 0.323 | 13.5 | -1.27 | -- | 0.676 | -- | -- | -0.72 | -- | 23 | 305 | -- | -- |
| 84.4 | 0.43 | 13.5 | -- | 0.343 | 0.533 | -- | -- | -0.548 | 21.8 | 24.2 | 35 | -- | -- |
| 61.11 | 0.365 | 13.5 | -1.15 | -- | -- | -- | -- | -0.629 | -- | -- | -- | -- | -- |
| 89.03 | 0.441 | 13.4 | -- | 0.354 | -- | -- | -- | -0.496 | 19.4 | -- | -- | -- | -- |
| 89.13 | 0.44 | 13.4 | -- | -- | 0.478 | -- | -- | -0.544 | -- | 24.2 | 276 | -- | -- |
| 95.73 | 0.457 | 13.4 | -- | -- | -- | -- | -- | -0.501 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.87 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 2 | 37.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 5 | 37.62 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 32 | 38.33 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 71 | 39.30 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 122 | 40.04 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 160 | 40.68 | temperature | 25.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 195 | 41.07 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 226 | 41.34 | temperature | 10.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 270 | 41.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 276 | 41.61 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 312 | 41.84 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 334 | 41.95 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 335 | 41.95 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 362 | 42.07 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 409 | 42.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 480 | 42.50 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 484 | 42.52 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 488 | 42.53 | temperature | 20.0 | 30 | > th | dose dependent | no | NA | NA |
| 503 | 42.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 540 | 42.73 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 546 | 42.74 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 552 | 42.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 558 | 42.77 | radiation | 1.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 571 | 42.79 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 585 | 42.82 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 636 | 42.92 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 663 | 42.96 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 21 |
| 682 | 43.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 698 | 43.03 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 724 | 43.08 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 725 | 43.09 | radiation | 30.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 735 | 43.11 | temperature | 30.0 | 90 | < th | dose independent | sin | 4 | NA |
| 776 | 43.19 | radiation | 20.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 812 | 43.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 822 | 43.25 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 839 | 43.28 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 845 | 43.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 847 | 43.29 | temperature | 30.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 852 | 43.30 | temperature | 30.0 | 90 | > th | dose independent | sin | 4 | NA |
| 853 | 43.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 855 | 43.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 935 | 43.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 945 | 43.43 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 7 | 11 |