Os01g0821800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Endothelial monocyte-activating polypeptide II precursor pro-EMAP II family protein.
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Os01g0821800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Endothelial monocyte-activating polypeptide II precursor pro-EMAP II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.22 | 0.206 | 10.1 | 0.0728 | 0.00999 | 0.302 | 0.393 | -1.01 | -0.104 | 11.5 | 20.5 | 2811 | -- | -- |
| 20.52 | 0.211 | 10.1 | 0.242 | 0.0162 | 0.547 | 0.382 | -- | -0.0564 | 11.4 | 19.27 | 2701 | -- | -- |
| 19.76 | 0.207 | 10.1 | 0.0823 | 0.0193 | 0.307 | -- | -1.01 | -0.102 | 10.3 | 20.5 | 2634 | -- | -- |
| 21.06 | 0.214 | 10.1 | 0.265 | 0.0249 | 0.571 | -- | -- | -0.0376 | 9.71 | 18.7 | 2415 | -- | -- |
| 19.78 | 0.207 | 10.1 | 0.0913 | -- | 0.299 | -- | -1.01 | -0.101 | -- | 20.53 | 2634 | -- | -- |
| 25.33 | 0.236 | 10.1 | 0.513 | 0.00998 | -- | -0.433 | -- | 0.0631 | 0.783 | -- | -- | -- | -- |
| 26.09 | 0.239 | 10.1 | 0.529 | 0.0272 | -- | -- | -- | 0.0649 | 5.07 | -- | -- | -- | -- |
| 21.12 | 0.214 | 10.1 | 0.257 | -- | 0.574 | -- | -- | -0.0423 | -- | 18.6 | 2547 | -- | -- |
| 21.79 | 0.217 | 10.1 | -- | 0.00878 | 0.682 | -- | -- | -0.101 | 9.59 | 18.44 | 10956 | -- | -- |
| 26.13 | 0.239 | 10.1 | 0.53 | -- | -- | -- | -- | 0.0656 | -- | -- | -- | -- | -- |
| 33.46 | 0.271 | 10.1 | -- | 0.0368 | -- | -- | -- | 0.00601 | 4.57 | -- | -- | -- | -- |
| 21.79 | 0.217 | 10.1 | -- | -- | 0.674 | -- | -- | -0.104 | -- | 18.51 | 10957 | -- | -- |
| 33.53 | 0.27 | 10.1 | -- | -- | -- | -- | -- | 0.00682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 2 | 18.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 16 | 18.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 42 | 18.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 43 | 18.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 49 | 19.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 55 | 19.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 59 | 19.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 162 | 19.33 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 188 | 19.37 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 260 | 19.48 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 297 | 19.54 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 680 | 20.00 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 681 | 20.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 694 | 20.02 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 727 | 20.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 737 | 20.06 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 747 | 20.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 769 | 20.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 781 | 20.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 805 | 20.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 825 | 20.13 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 837 | 20.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 844 | 20.15 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 845 | 20.15 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 851 | 20.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 871 | 20.17 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 900 | 20.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 919 | 20.19 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 928 | 20.21 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 960 | 20.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 975 | 20.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 996 | 20.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |