BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0819900 Os01g0819900|AK067401
(825 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0819900 Protein kinase domain containing protein 1618 0.0
AK110055 270 2e-72
Os01g0616100 Protein kinase-like domain containing protein 67 5e-11
>Os01g0819900 Protein kinase domain containing protein
Length = 825
Score = 1618 bits (4191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 792/825 (96%), Positives = 792/825 (96%)
Query: 1 MFKFLKEVVAGSGSGLKDFPYTIGEPYASAWGSWTHHRGTSKDDGSPVSIFSLSGSNPQD 60
MFKFLKEVVAGSGSGLKDFPYTIGEPYASAWGSWTHHRGTSKDDGSPVSIFSLSGSNPQD
Sbjct: 1 MFKFLKEVVAGSGSGLKDFPYTIGEPYASAWGSWTHHRGTSKDDGSPVSIFSLSGSNPQD 60
Query: 61 RHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKLKELN 120
RHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKLKELN
Sbjct: 61 RHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKLKELN 120
Query: 121 LGGTQRDEYFAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDWKLHAFDVLSEFD 180
LGGTQRDEYFAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LGGTQRDEYFAWGLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 ANNEASNSPMLQFEWLVGTQYKPMELTKSDWVSIRKSPPWAIDSWGLGCLIYELFSGAKL 240
ANNEASNSPMLQFEWLVGTQYKPMELTKSDWVSIRKSPPWAIDSWGLGCLIYELFSGAKL
Sbjct: 181 ANNEASNSPMLQFEWLVGTQYKPMELTKSDWVSIRKSPPWAIDSWGLGCLIYELFSGAKL 240
Query: 241 TRTEDLRNTASIPKSLLPDYQRLLSSAPSRRMNPSKLIDNSEFFQNKLVETIQFMEVLNL 300
TRTEDLRNTASIPKSLLPDYQRLLSSAPSRRMNPSKLIDNSEFFQNKLVETIQFMEVLNL
Sbjct: 241 TRTEDLRNTASIPKSLLPDYQRLLSSAPSRRMNPSKLIDNSEFFQNKLVETIQFMEVLNL 300
Query: 301 KDSVEKDSFFRKLPNIAEQLPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPAD 360
KDSVEKDSFFRKLPNIAEQLPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPAD
Sbjct: 301 KDSVEKDSFFRKLPNIAEQLPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPAD 360
Query: 361 QFSAKVLPTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFL 420
QFSAKVLPTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFL
Sbjct: 361 QFSAKVLPTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFL 420
Query: 421 RELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIANYMNDGTRK 480
RELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIANYMNDGTRK
Sbjct: 421 RELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIANYMNDGTRK 480
Query: 481 RVLINAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNVVVLTFDPDSDVRT 540
RVLINAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNVVVLTFDPDSDVRT
Sbjct: 481 RVLINAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNVVVLTFDPDSDVRT 540
Query: 541 KAFQATDQFLQIAKQHHEKLTMGDNSAAEATGIQLKPGNAGLLGWAMSSLTQKGKGSDHG 600
KAFQATDQFLQIAKQHHEKLTMGDNSAAEATGIQLKPGNAGLLGWAMSSLTQKGKGSDHG
Sbjct: 541 KAFQATDQFLQIAKQHHEKLTMGDNSAAEATGIQLKPGNAGLLGWAMSSLTQKGKGSDHG 600
Query: 601 PXXXXXXXXXXXXXXXXXXXDNRSSTVAYAPSTSSSLDQTAPASARSSVDGWGEIENDNT 660
P DNRSSTVAYAPSTSSSLDQTAPASARSSVDGWGEIENDNT
Sbjct: 601 PVSSANASNSQISATSSVTSDNRSSTVAYAPSTSSSLDQTAPASARSSVDGWGEIENDNT 660
Query: 661 QEENGSDKEGWDDVDPFDEKPPPSLLSNIQAAQKRPVAQPKQPVSNSSRLNQPKVPKPEE 720
QEENGSDKEGWDDVDPFDEKPPPSLLSNIQAAQKRPVAQPKQPVSNSSRLNQPKVPKPEE
Sbjct: 661 QEENGSDKEGWDDVDPFDEKPPPSLLSNIQAAQKRPVAQPKQPVSNSSRLNQPKVPKPEE 720
Query: 721 DPLWGXXXXXXXXXXXXXXDIKPSTSHNDDDDLWGSIAAPPPKSAGKPLKPPAAANSDDL 780
DPLWG DIKPSTSHNDDDDLWGSIAAPPPKSAGKPLKPPAAANSDDL
Sbjct: 721 DPLWGSIAAPAPKNASKSSDIKPSTSHNDDDDLWGSIAAPPPKSAGKPLKPPAAANSDDL 780
Query: 781 WGAIAAPPPSTKARPLASSGRGRGTKPAQPKLGAQRIGRTSSTGM 825
WGAIAAPPPSTKARPLASSGRGRGTKPAQPKLGAQRIGRTSSTGM
Sbjct: 781 WGAIAAPPPSTKARPLASSGRGRGTKPAQPKLGAQRIGRTSSTGM 825
>AK110055
Length = 951
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 295/564 (52%), Gaps = 46/564 (8%)
Query: 21 YTIGEPYASAWGS--WTHHRGTSKDDGSPVSIFSLSGSNPQD----RHLVAGRNGVKRLR 74
+TIG+ W+ H T +DD S ++ + S+P + L +N ++LR
Sbjct: 30 FTIGQELVEYCSRSLWSLHSATKRDDNSACTVLAFDLSHPHNATRANLLPFAKNAARKLR 89
Query: 75 TVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKL--KELNLGGTQRDEYFAW 132
T RHPN+L L S E ++YI E TPL + L E QR ++ W
Sbjct: 90 TTRHPNVLKLLDSAET--------NSSVYIAVEKATPLYKVLAQSEDKRATPQRQDWIVW 141
Query: 133 GLHQISKAVSFLNNDCKLVHGNVCVTSVVVTQTLDWKLHAFDVLSEFDANNEASNSPMLQ 192
GL I A+ FLN D HGN+ S+ +T +WKL F+ L+ + EA + +
Sbjct: 142 GLSSIVSALKFLNADAASTHGNLRPESIFITAAGEWKLAGFEALTP---HAEAPHGLLFT 198
Query: 193 FEWLV--GTQYKPMELTKSDWVSIRKSPPWAIDSWGLGCLIYELFSGAKLTRTEDLRNTA 250
L+ +Y P E+ ++ W + +DS+ L + E F+G +T TA
Sbjct: 199 QGSLLPDANRYAPPEVRQNGWNILSSMDSTLLDSYALALVAIEAFNGPLPPQT----GTA 254
Query: 251 S-----IPKSLLPDYQRLLSSAPSRRMNPSKLIDNSE-----FFQNKLVETIQFMEVLNL 300
+ +P+ L QR+L R +K+ + E F +N LV+ + ++ L
Sbjct: 255 APPRGHVPQQLYSALQRMLVPNAKTRSTVAKVWEAGEGEGGFFKENTLVKVARGLDGFLL 314
Query: 301 KDSVEKDSFFRKLPNIAEQLPREIVLKKLLPVLASALE-------FGSAAAPALVVL--- 350
EK + L + + ++ K+LP L +AL SA+ A V+L
Sbjct: 315 ATENEKADIIKLLQQKPDSFTPDFLMYKVLPTLVAALSAVPPPGTIPSASTQASVLLPLV 374
Query: 351 LKMGSWLPADQFSAKVLPTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVA 410
L++G LP D+++A V+P ++K +AS DR+ R++LL+++ + E + +TV ++++P++
Sbjct: 375 LRLGQPLPNDEWTANVVPPLLKAYASPDRSTRMALLENLSLYVERMDNRTVTDKLWPNLI 434
Query: 411 TGFSDTSAFLRELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 470
TGF+D+ A +RE TL+++L LAPKLS R ++ LL+ L++ QVD E IRTNTTILLG +
Sbjct: 435 TGFNDSVAVIREATLRAILPLAPKLSDRILNNDLLRVLARTQVDPEAGIRTNTTILLGRL 494
Query: 471 ANYMNDGTRKRVLINAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNVVVL 530
+++ TRK+VLI AF+ R+L+D F AR AG+MAL T ++ + A +++P V
Sbjct: 495 VPHLSVSTRKKVLIPAFS-RSLKDQFVHARVAGLMALMATGDSFDHDDCARQVVPAVAPC 553
Query: 531 TFDPDSDVRTKAFQATDQFLQIAK 554
D + VR +A +A FL+ K
Sbjct: 554 MVDKEKLVRDQADKAIKMFLEKIK 577
>Os01g0616100 Protein kinase-like domain containing protein
Length = 648
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 250 ASIPKSLLPDYQRLLSSAPSRRMNPSKL-IDNSEFFQNKL-VETIQFMEVLNLKDSVEKD 307
++IP L+ D QR+LS + R PS + S FF+N + ++F++ L +D+++K
Sbjct: 15 SNIPADLVVDLQRMLSVDVASR--PSAMAFTGSSFFRNDTRLRALRFLDHLLERDNMQKT 72
Query: 308 SFFRKLPNIAEQLPREIVLKKLLPVLASALEFGSAAAPALVVLLKMGSWLPADQFSAKVL 367
F + L ++ + ++ K+LP L + L L ++L + F L
Sbjct: 73 EFLKALSDMWKDFDSRVLRYKVLPPLCAELRNMVMQPMILPMVLTIAESQDKGDFELSTL 132
Query: 368 PTIVKLFASNDRAIRVSLLQHIDQFGESLTAQTVDEQVFPHVATGFSDTSAFLRELTLKS 427
P +V +F S + L++H D T + + V P + + DT L+E L+
Sbjct: 133 PALVPVFTSASGETLLLLVKHADLIIHKATQEHLISHVLPMLVRAYDDTDPRLQEEVLRR 192
Query: 428 MLVLAPKLSQRTISGSLLKYLSKLQVDEE-PAIRTNTTILLGNI 470
+ L+ +L + + S+L + L + A+R N LG++
Sbjct: 193 TVPLSRQLDVKLLKQSVLPRVHGLALKTTVAAVRVNALRCLGDL 236
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,811,356
Number of extensions: 1280721
Number of successful extensions: 4810
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4792
Number of HSP's successfully gapped: 3
Length of query: 825
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 716
Effective length of database: 11,344,475
Effective search space: 8122644100
Effective search space used: 8122644100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 160 (66.2 bits)