BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0758400 Os01g0758400|AK071777
         (425 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0758400  Similar to Phosphatidate cytidylyltransferase ...   842   0.0  
Os10g0327300  Similar to Phosphatidate cytidylyltransferase ...   651   0.0  

>Os01g0758400 Similar to Phosphatidate cytidylyltransferase (EC 2.7.7.41)
           (CDP-diglyceride synthetase) (CDP-diglyceride
           pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)
           (CTP:phosphatidate cytidylyltransferase) (CDP-DAG
           synthase) (CDP-DG synthetase)
          Length = 425

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/425 (96%), Positives = 409/425 (96%)

Query: 1   MERDTSSSDVSASHVGRARQRRRPTEATADGNRTNGPALLVNDQNKYKSMLIRTYSTVWM 60
           MERDTSSSDVSASHVGRARQRRRPTEATADGNRTNGPALLVNDQNKYKSMLIRTYSTVWM
Sbjct: 1   MERDTSSSDVSASHVGRARQRRRPTEATADGNRTNGPALLVNDQNKYKSMLIRTYSTVWM 60

Query: 61  IGGFVLIVYMGHLYIWAMVVVIQIFMAKELFNLLRKSSEEKQLPGFRLLNWHFFFTAMLF 120
           IGGFVLIVYMGHLYIWAMVVVIQIFMAKELFNLLRKSSEEKQLPGFRLLNWHFFFTAMLF
Sbjct: 61  IGGFVLIVYMGHLYIWAMVVVIQIFMAKELFNLLRKSSEEKQLPGFRLLNWHFFFTAMLF 120

Query: 121 TYGRFLSRQLVNTVTSDHLLYKVVSGLIKYQMFICYFLYIAGFVWXXXXXXXXXXXXXXX 180
           TYGRFLSRQLVNTVTSDHLLYKVVSGLIKYQMFICYFLYIAGFVW               
Sbjct: 121 TYGRFLSRQLVNTVTSDHLLYKVVSGLIKYQMFICYFLYIAGFVWFILTLKKKTYKYQFK 180

Query: 181 XYAWTHMILLTVFAQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFLGRTPLIKLS 240
            YAWTHMILLTVFAQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFLGRTPLIKLS
Sbjct: 181 QYAWTHMILLTVFAQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFLGRTPLIKLS 240

Query: 241 PKKTWEGFIGASVTTIISAFVLANVMGRFQWLTCPRKDLSTGWLRCDPGPMFKPEHYSLG 300
           PKKTWEGFIGASVTTIISAFVLANVMGRFQWLTCPRKDLSTGWLRCDPGPMFKPEHYSLG
Sbjct: 241 PKKTWEGFIGASVTTIISAFVLANVMGRFQWLTCPRKDLSTGWLRCDPGPMFKPEHYSLG 300

Query: 301 EWVPKGFPWKEVVLLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG 360
           EWVPKGFPWKEVVLLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG
Sbjct: 301 EWVPKGFPWKEVVLLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG 360

Query: 361 ITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQILRNLTFEEQKFLYQQLGEIYRER 420
           ITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQILRNLTFEEQKFLYQQLGEIYRER
Sbjct: 361 ITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQILRNLTFEEQKFLYQQLGEIYRER 420

Query: 421 QLMQS 425
           QLMQS
Sbjct: 421 QLMQS 425



>Os10g0327300 Similar to Phosphatidate cytidylyltransferase (EC 2.7.7.41)
          Length = 430

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/421 (76%), Positives = 356/421 (84%), Gaps = 10/421 (2%)

Query: 2   ERDTSSS-DV-----SASHVGRARQRRRPTEATADGNRTNGPALLVNDQNKYKSMLIRTY 55
           ERD  S  DV     S +H  R RQR+R ++A +D N+TNG  LL+NDQNKYKSMLIRTY
Sbjct: 9   ERDNGSGGDVTPGTPSPTHGARVRQRKRSSDAPSDVNKTNGANLLLNDQNKYKSMLIRTY 68

Query: 56  STVWMIGGFVLIVYMGHLYIWAMVVVIQIFMAKELFNLLRKSSEEKQLPGFRLLNWHFFF 115
           S++WM+ GFV ++YMGHLYIWAMVVVIQIFMA ELFNLLRK++E++QLPGFRLLNWHFFF
Sbjct: 69  SSLWMMAGFVFLIYMGHLYIWAMVVVIQIFMASELFNLLRKANEDRQLPGFRLLNWHFFF 128

Query: 116 TAMLFTYGRFLSRQLVNTVTSDHLLYKVVSGLIKYQMFICYFLYIAGFVWXXXXXXXXXX 175
           TAMLF YGRFLSRQLVNTVTSD LLYK+VSGLIKYQMFICYFLYIAGFVW          
Sbjct: 129 TAMLFAYGRFLSRQLVNTVTSDKLLYKLVSGLIKYQMFICYFLYIAGFVWFILTLKKKAY 188

Query: 176 XXXXXXYAWTHMILLTVFAQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFLGRTP 235
                 YAWTHMILL VFAQSSFTVANI+EGMFWFLLPASLI IND+AAY FGFF G+TP
Sbjct: 189 KYQFSQYAWTHMILLMVFAQSSFTVANIYEGMFWFLLPASLIAINDVAAYFFGFFFGKTP 248

Query: 236 LIKLSPKKTWEGFIGASVTTIISAFVLANVMGRFQWLTCPRKDLSTGWLRCDPGPMFKPE 295
           LIKLSPKKTWEGF+GASVTT++SAFVLAN MG FQWLTCPRKDLSTGWL CDPG +F PE
Sbjct: 249 LIKLSPKKTWEGFLGASVTTMLSAFVLANFMGHFQWLTCPRKDLSTGWLHCDPGSIFTPE 308

Query: 296 HYSLGEWVPKGFPWKEVVLLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSI 355
            Y L  W+    PW+EV ++P+QWHALALGLFASIIAPFGGFFASGFKRAFK KDFGDSI
Sbjct: 309 SYDLPGWI----PWREVAIMPIQWHALALGLFASIIAPFGGFFASGFKRAFKFKDFGDSI 364

Query: 356 PGHGGITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQILRNLTFEEQKFLYQQLGE 415
           PGHGG TDRMDCQMVMAVFAYIY+QSF+  Q+ SVE I+EQILRNLTFEEQ  LY+QLG+
Sbjct: 365 PGHGGFTDRMDCQMVMAVFAYIYYQSFVMVQDLSVETIMEQILRNLTFEEQHDLYEQLGK 424

Query: 416 I 416
           +
Sbjct: 425 L 425



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.329    0.141    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,282,261
Number of extensions: 538920
Number of successful extensions: 1506
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1502
Number of HSP's successfully gapped: 2
Length of query: 425
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 321
Effective length of database: 11,605,545
Effective search space: 3725379945
Effective search space used: 3725379945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)