BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0743100 Os01g0743100|Os01g0743100
         (378 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0743100  IQ calmodulin-binding region domain containing...   543   e-155
Os05g0521900  IQ calmodulin-binding region domain containing...   172   3e-43

>Os01g0743100 IQ calmodulin-binding region domain containing protein
          Length = 378

 Score =  543 bits (1399), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/378 (73%), Positives = 277/378 (73%)

Query: 1   MGRIIRWLKKLLTGRKEAHKGLKENHAVSDGAEKEKSRWSFAKHRRSGVDSGXXXXXXXX 60
           MGRIIRWLKKLLTGRKEAHKGLKENHAVSDGAEKEKSRWSFAKHRRSGVDSG        
Sbjct: 1   MGRIIRWLKKLLTGRKEAHKGLKENHAVSDGAEKEKSRWSFAKHRRSGVDSGRRPSEAAL 60

Query: 61  XXXXXXXXXXXXXXXPCHCGEVENAIARREKAAMVIQKXXXXXXXXXXXXXXXXXVKLQA 120
                          PCHCGEVENAIARREKAAMVIQK                 VKLQA
Sbjct: 61  AAVAAVAVEPSEVRRPCHCGEVENAIARREKAAMVIQKAYRGYLARKALRALRSLVKLQA 120

Query: 121 LVRGYLVRKQAATTLHRLQALMXXXXXXXXXXXXXXXXXMEQERISVEETRLKTTTPGHR 180
           LVRGYLVRKQAATTLHRLQALM                 MEQERISVEETRLKTTTPGHR
Sbjct: 121 LVRGYLVRKQAATTLHRLQALMRQQASSRAATRASYRKSMEQERISVEETRLKTTTPGHR 180

Query: 181 RRLSDSADSNYERSPRIVEMDTCXXXXXXXXXXXXXXXXXXXDCLTPAPMPPAPLSCSSP 240
           RRLSDSADSNYERSPRIVEMDTC                   DCLTPAPMPPAPLSCSSP
Sbjct: 181 RRLSDSADSNYERSPRIVEMDTCHRRSRSSRIAIRHSRDHSSDCLTPAPMPPAPLSCSSP 240

Query: 241 ISIKQPPRLSIQRSQHHERDTRHAKTAHNTPRLGAPPYGSSPANKSVDGMARARLSHRDA 300
           ISIKQPPRLSIQRSQHHERDTRHAKTAHNTPRLGAPPYGSSPANKSVDGMARARLSHRDA
Sbjct: 241 ISIKQPPRLSIQRSQHHERDTRHAKTAHNTPRLGAPPYGSSPANKSVDGMARARLSHRDA 300

Query: 301 LGSPRYMAGTASSAARTRCXXXXXXXXXXXXXXXXXXXXXXXXXDSGFCFECSEDSRPGY 360
           LGSPRYMAGTASSAARTRC                         DSGFCFECSEDSRPGY
Sbjct: 301 LGSPRYMAGTASSAARTRCQSAPRQRQAAEAPARSRRSCSRTTQDSGFCFECSEDSRPGY 360

Query: 361 SEELSDEAARDYYLDRMW 378
           SEELSDEAARDYYLDRMW
Sbjct: 361 SEELSDEAARDYYLDRMW 378



>Os05g0521900 IQ calmodulin-binding region domain containing protein
          Length = 363

 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/394 (36%), Positives = 173/394 (43%), Gaps = 51/394 (12%)

Query: 5   IRWLKKLLTGRKEAHKGLKENHAVSDGAEK-------EKSRWSFAKHRRSGVDSGXXXXX 57
           +RW KK+LTG+KE     ++ H+ + GA         E+ RWSFAK R S  D       
Sbjct: 1   MRWFKKVLTGKKEGGDRDRKEHSAAGGANGGVAPPPMERRRWSFAKPRSSFADGSRRPSV 60

Query: 58  XXXXXXXXXXXXXXXXXXPCHCGEVENAIARREKAAMVIQKXXXXXXXXXXXXXXXXXVK 117
                             PC CG+      R  +AA++IQK                 VK
Sbjct: 61  TAVVAGELSQVR------PCSCGQ-----QREVEAAVMIQKAFRGYLARRALRALKALVK 109

Query: 118 LQALVRGYLVRKQAATTLHRLQALMXXXXXXXXXXXXXXXXXMEQERISVEET--RLKTT 175
           +QALVRGYLVRKQAATTL RLQALM                 +EQERI V+    R+KT 
Sbjct: 110 IQALVRGYLVRKQAATTLQRLQALMRLQASSRAIKMASSRKSVEQERIVVQMQGGRVKTL 169

Query: 176 T--PGHRRRLSDSADSNYERSPRIVEMDTCXXXXXXXXXXXXXXXXXXXDCLTPAPMPPA 233
           T    HRRR+SD  D N++RSPRIVEMDTC                   D  TP  +   
Sbjct: 170 TLPVVHRRRVSDGGDINFDRSPRIVEMDTCQLRCRSSRITSRYAADPPPDG-TPGSV--- 225

Query: 234 PLSCSSPISIKQPPRLSIQRSQHHERDTR-HAKTAHNTPRLGAP-PYG----SSPANKSV 287
           PLS       K PP   +Q ++ HE D R   KT HNTPRL A  P G    +SPA   V
Sbjct: 226 PLSSPHLYCYKPPPSRHLQ-AEEHEHDARAQPKTTHNTPRLAAALPAGYHGPASPAKGRV 284

Query: 288 DGMARARLSHRDALGSPRYMAGTASSAARTRCXXXXXXXXXXXXX---XXXXXXXXXXXX 344
                          SPRYMA TASS AR RC                            
Sbjct: 285 --------------VSPRYMADTASSVARARCQSAPRQRHGAAGEPRPSLARAGSRKSRP 330

Query: 345 DSGFCFECSEDSRPGYSEELSDEAARDYYLDRMW 378
           DS    + SE SR     E SD+  RDYYLD++W
Sbjct: 331 DSAISLKSSEMSR-HEDSEFSDDVTRDYYLDQLW 363



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.129    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,200,744
Number of extensions: 355156
Number of successful extensions: 1968
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1959
Number of HSP's successfully gapped: 2
Length of query: 378
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 275
Effective length of database: 11,657,759
Effective search space: 3205883725
Effective search space used: 3205883725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)