BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0214200 Os01g0214200|AK061229
(238 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0214200 Lipolytic enzyme, G-D-S-L family protein 458 e-129
Os10g0476700 Lipolytic enzyme, G-D-S-L family protein 231 3e-61
Os09g0121900 212 2e-55
Os06g0156400 Lipolytic enzyme, G-D-S-L family protein 195 2e-50
Os11g0708400 Similar to CPRD49 158 3e-39
Os04g0269700 Lipolytic enzyme, G-D-S-L family protein 129 1e-30
Os10g0339200 72 4e-13
>Os01g0214200 Lipolytic enzyme, G-D-S-L family protein
Length = 238
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/238 (93%), Positives = 223/238 (93%)
Query: 1 MRPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVLXXXXXXX 60
MRPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVL
Sbjct: 1 MRPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVLARAMEGA 60
Query: 61 XXXXXXXXVTVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITP 120
VTVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITP
Sbjct: 61 AAAADPAAVTVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITP 120
Query: 121 PPIYEPARIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDW 180
PPIYEPARIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDW
Sbjct: 121 PPIYEPARIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDW 180
Query: 181 QTSALCDGLHFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFEI 238
QTSALCDGLHFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFEI
Sbjct: 181 QTSALCDGLHFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFEI 238
>Os10g0476700 Lipolytic enzyme, G-D-S-L family protein
Length = 270
Score = 231 bits (589), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 151/240 (62%), Gaps = 5/240 (2%)
Query: 1 MRPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVLXXXXXXX 60
+RPR+VLFGDSITE SF GGWGAALAD ++RKADVV+RG+ GYNTRWAL L
Sbjct: 33 VRPRMVLFGDSITEQSFRPGGWGAALADTYSRKADVVVRGYGGYNTRWAL-FLLHQIFPL 91
Query: 61 XXXXXXXXVTVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITP 120
TVFFGANDA+L R QHVP+ EY+ NL+ I + K+ S I+LITP
Sbjct: 92 VGIVPPLATTVFFGANDAALLGRTGERQHVPVAEYKENLKKIVNHLKDCSKSMLIVLITP 151
Query: 121 PPIYEPAR---IRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQF 177
PPI E R R +YGE+ KLPERTNE AG YA C+ +A+E+N IDIW+KMQ+
Sbjct: 152 PPIDEDGRERFARSLYGEE-ARKLPERTNEMAGVYASQCIELAREMNIHCIDIWSKMQET 210
Query: 178 PDWQTSALCDGLHFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFE 237
WQ L DGLH TP GN ++ V++TL S+G + D P ID P KAF+
Sbjct: 211 AGWQKLYLSDGLHLTPEGNAVVHKEVVQTLRSVGLKAEEMPYDFPHHSRIDGSCPEKAFQ 270
>Os09g0121900
Length = 132
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/104 (96%), Positives = 101/104 (97%)
Query: 85 QVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITPPPIYEPARIRDMYGEDDPSKLPER 144
QVHQHVPLDEYQSNLR+ICAYFKEQWPSTKIILITPPPIYEP RIRDMYGEDDPSKLPER
Sbjct: 2 QVHQHVPLDEYQSNLRAICAYFKEQWPSTKIILITPPPIYEPVRIRDMYGEDDPSKLPER 61
Query: 145 TNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDG 188
TNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSAL G
Sbjct: 62 TNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALWYG 105
>Os06g0156400 Lipolytic enzyme, G-D-S-L family protein
Length = 189
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 70 TVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITPPPIYEPARI 129
TV FGANDASLP R QHVPL EY+ NLR+ICA WPS +ILITPPP+++ AR+
Sbjct: 22 TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV 81
Query: 130 RDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDGL 189
R YG D + LPERTNE+AG YA+AC+ VA E VIDIW+KMQ+FP W++S L DGL
Sbjct: 82 RYQYG-GDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGL 140
Query: 190 HFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFE 237
H TP GN+++F+ V+ L+ +L DLPLF D+DP +P+K+F+
Sbjct: 141 HLTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFD 188
>Os11g0708400 Similar to CPRD49
Length = 260
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 124/209 (59%), Gaps = 8/209 (3%)
Query: 2 RPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVLXXXXXXXX 61
RP VLFG SI + SF++GGWGAALAD +ARKAD++LRG+ G+N+R AL+V+
Sbjct: 10 RPLFVLFGSSIVQFSFSNGGWGAALADIYARKADILLRGYIGWNSRRALQVI-DKIFPKD 68
Query: 62 XXXXXXXVTVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITPP 121
V V+FG ND+ + HVPL+EY N+R I + K T++I ++ P
Sbjct: 69 SPVQPSLVIVYFGGNDSVAAHSSGLGPHVPLEEYIDNMRKIADHLKSLSEKTRVIFLSCP 128
Query: 122 PIYEPARIRDMYGEDDPSKLPE--RTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPD 179
P+ E + + + L E RTNE Y++AC+++ KE++ V+D+W MQ+ D
Sbjct: 129 PLNE-----ETLRKSTSTVLSEIVRTNETCRLYSEACVSLCKEMDLKVVDLWNAMQKRDD 183
Query: 180 WQTSALCDGLHFTPLGNKILFDCVLETLE 208
W T+ DGLH + G+KI+ + +L L+
Sbjct: 184 WATACFTDGLHLSEEGSKIVVEEILRILK 212
>Os04g0269700 Lipolytic enzyme, G-D-S-L family protein
Length = 209
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/64 (92%), Positives = 59/64 (92%)
Query: 130 RDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDGL 189
RDMYGEDDPSKLPERTNEA GTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALC GL
Sbjct: 142 RDMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRGL 201
Query: 190 HFTP 193
P
Sbjct: 202 EAKP 205
>Os10g0339200
Length = 95
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%)
Query: 74 GANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITPPPIYEPARIR 130
ANDASLPER QHV L EY+ NLR+IC WPS IILIT PP+++ AR+R
Sbjct: 39 SANDASLPERASTLQHVLLPEYKDNLRAICGLLTATWPSVIIILITLPPVHDVARVR 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,419,669
Number of extensions: 331115
Number of successful extensions: 778
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 773
Number of HSP's successfully gapped: 8
Length of query: 238
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 140
Effective length of database: 11,918,829
Effective search space: 1668636060
Effective search space used: 1668636060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)