BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0187500 Os01g0187500|AK111592
         (261 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0187500  Similar to Zfwd3 protein (Fragment)                 533   e-152
Os03g0145600  Quinonprotein alcohol dehydrogenase-like domai...   178   4e-45
Os02g0677700  Quinonprotein alcohol dehydrogenase-like domai...    88   7e-18

>Os01g0187500 Similar to Zfwd3 protein (Fragment)
          Length = 261

 Score =  533 bits (1372), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   CVDAIKMGGKIGCMITHGPWIFVGITKSVEAWNTQTGMKSSLREPSGLVCSMTIKDEMLF 60
           CVDAIKMGGKIGCMITHGPWIFVGITKSVEAWNTQTGMKSSLREPSGLVCSMTIKDEMLF
Sbjct: 1   CVDAIKMGGKIGCMITHGPWIFVGITKSVEAWNTQTGMKSSLREPSGLVCSMTIKDEMLF 60

Query: 61  AGTGDGRIMAWKIPDKKGDSGPVAILSGHERQVISLGVSVTRLYSGSLDKTIKVWDLKTL 120
           AGTGDGRIMAWKIPDKKGDSGPVAILSGHERQVISLGVSVTRLYSGSLDKTIKVWDLKTL
Sbjct: 61  AGTGDGRIMAWKIPDKKGDSGPVAILSGHERQVISLGVSVTRLYSGSLDKTIKVWDLKTL 120

Query: 121 QCVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGVRTLFG 180
           QCVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGVRTLFG
Sbjct: 121 QCVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSGDLQVIYTHSEEHGVRTLFG 180

Query: 181 MHRVGKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFTGDGAGEL 240
           MHRVGKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFTGDGAGEL
Sbjct: 181 MHRVGKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFTGDGAGEL 240

Query: 241 KVWRWAPEEEPATPALVKSSM 261
           KVWRWAPEEEPATPALVKSSM
Sbjct: 241 KVWRWAPEEEPATPALVKSSM 261



>Os03g0145600 Quinonprotein alcohol dehydrogenase-like domain containing protein
          Length = 427

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/250 (38%), Positives = 148/250 (59%), Gaps = 6/250 (2%)

Query: 1   CVDAIKMG-GKIGCMITHGPWIFVGITKSVEAWNTQTGMKSSLREPSGLVCSMTIKDE-M 58
           CV   +M  G++  +I  GPW+  G+  +V+A +T TG +  LR P+  + +M  +DE  
Sbjct: 165 CVRVEEMQEGEVHKLIAMGPWVLAGVRGAVKAIHTGTGKELRLRGPASQITAMLAEDEDH 224

Query: 59  LFAGTGDGRIMAWKIPDKKGDSGPVAILSGHERQVISLGVSVTRLYSGSLDKTIKVWDLK 118
           LFAG  DG +  W++  ++     VA L+GH + V+SL      LYSGS D +I+VWDL 
Sbjct: 225 LFAGAEDGAVFMWRMNQEQQSFDEVAALTGHYKAVVSLAQGKGALYSGSTDGSIRVWDLD 284

Query: 119 TLQCVQTLSEHKAAVTSVLCWDEKLLSCSLDKTVKIWAASKSG---DLQVIYTHSEEHGV 175
           T +C+ + + H + VT++LCW+  LLS S D TVK+W         DL+V YTH E+  V
Sbjct: 285 THRCIYSFAGHSSTVTALLCWERFLLSSSDDGTVKVWQWKPDHDDLDLEVHYTHKEDERV 344

Query: 176 RTLFGMHRVGKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFTGD 235
            ++ G +   + PVL  S      +R++DLPS  + G +    EVRTI + + G++FTGD
Sbjct: 345 VSMDGTYDADEKPVLLVS-RGDGVVRVYDLPSLKKRGDIICDDEVRTISVRSRGVVFTGD 403

Query: 236 GAGELKVWRW 245
            +GE++V +W
Sbjct: 404 ASGEVRVVKW 413



>Os02g0677700 Quinonprotein alcohol dehydrogenase-like domain containing protein
          Length = 79

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)

Query: 174 GVRTLFGMHRVGKTPVLFCSLHNSNCIRLFDLPSFDEMGKLFSKKEVRTIELAAGGLLFT 233
           G   L GM      PVL CSL N N +RL+DLPSF + G++FSK+E+R I++   GL FT
Sbjct: 1   GALALSGMPDAQSKPVLLCSL-NDNTVRLYDLPSFSDRGRIFSKQEIRAIQVGPSGLFFT 59

Query: 234 GDGAGELKVWRW 245
           GDG GELKVW+W
Sbjct: 60  GDGTGELKVWQW 71



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,827,838
Number of extensions: 418159
Number of successful extensions: 1501
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1525
Number of HSP's successfully gapped: 3
Length of query: 261
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 162
Effective length of database: 11,866,615
Effective search space: 1922391630
Effective search space used: 1922391630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)