Os03g0145600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os03g0145600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.47 | 0.678 | 8.26 | -2.04 | 1.94 | 1.93 | 1.9 | -0.272 | -0.754 | 9.86 | 24.04 | 1401 | -- | -- |
| 208.41 | 0.672 | 8.26 | -1.97 | 1.94 | 1.91 | 1.91 | -- | -0.774 | 9.85 | 23.56 | 1402 | -- | -- |
| 222.11 | 0.694 | 8.26 | -1.99 | 1.92 | 1.92 | -- | -0.279 | -0.758 | 9.72 | 23.81 | 1429 | -- | -- |
| 221.95 | 0.694 | 8.26 | -1.89 | 1.92 | 1.87 | -- | -- | -0.767 | 9.69 | 23.35 | 1438 | -- | -- |
| 437.44 | 0.974 | 8.3 | -1.8 | -- | 1.78 | -- | 0.412 | -0.787 | -- | 22.46 | 1500 | -- | -- |
| 347.27 | 0.874 | 8.18 | -1.29 | 1.88 | -- | 1.79 | -- | -0.412 | 9.45 | -- | -- | -- | -- |
| 359.01 | 0.887 | 8.18 | -1.22 | 1.87 | -- | -- | -- | -0.41 | 9.39 | -- | -- | -- | -- |
| 437.64 | 0.974 | 8.32 | -1.91 | -- | 1.84 | -- | -- | -0.828 | -- | 22.12 | 1499 | -- | -- |
| 309.03 | 0.819 | 8.19 | -- | 1.86 | 1.37 | -- | -- | -0.442 | 9.78 | 24.39 | 1428 | -- | -- |
| 563.91 | 1.11 | 8.23 | -1.23 | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
| 398.52 | 0.934 | 8.15 | -- | 1.87 | -- | -- | -- | -0.274 | 9.43 | -- | -- | -- | -- |
| 513.56 | 1.06 | 8.25 | -- | -- | 1.88 | -- | -- | -0.511 | -- | 22.12 | 1499 | -- | -- |
| 604.12 | 1.15 | 8.2 | -- | -- | -- | -- | -- | -0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 194.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 2 | 195.54 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 14 | 198.30 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 23 | 199.63 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 24 | 199.71 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 56 | 201.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 67 | 201.77 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 74 | 201.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 76 | 202.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 77 | 202.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 82 | 202.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 83 | 202.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 97 | 202.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 106 | 203.11 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 107 | 203.17 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 160 | 204.72 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 162 | 204.73 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 165 | 204.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 173 | 204.93 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 174 | 204.99 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 178 | 205.05 | temperature | 25.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 198 | 205.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 212 | 205.55 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 219 | 205.66 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 224 | 205.70 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 226 | 205.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 238 | 205.88 | temperature | 25.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 247 | 205.97 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 250 | 206.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 251 | 206.01 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 252 | 206.01 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 253 | 206.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 256 | 206.14 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 257 | 206.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 260 | 206.17 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 263 | 206.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 273 | 206.30 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 284 | 206.39 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 289 | 206.41 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 340 | 206.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 360 | 206.87 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 386 | 207.13 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 397 | 207.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 398 | 207.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 407 | 207.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 427 | 207.33 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 447 | 207.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 450 | 207.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 495 | 207.44 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 511 | 207.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 517 | 207.45 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 534 | 207.46 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 539 | 207.46 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 552 | 207.49 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 590 | 207.55 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 592 | 207.55 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 603 | 207.58 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 611 | 207.62 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 705 | 207.63 | temperature | 30.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 728 | 207.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 745 | 207.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 753 | 207.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 756 | 207.83 | temperature | 30.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 773 | 207.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 830 | 207.99 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 834 | 208.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 839 | 208.02 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 856 | 208.10 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 859 | 208.12 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 870 | 208.13 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 959 | 208.33 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |