BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0180300 Os01g0180300|AK120377
         (766 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0180300  Lipoprotein, type 6 family protein                 1117   0.0  
Os05g0180400  Prefoldin domain containing protein                 490   e-138

>Os01g0180300 Lipoprotein, type 6 family protein
          Length = 766

 Score = 1117 bits (2888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/686 (86%), Positives = 590/686 (86%)

Query: 66  LLGVSXXXXXXXXXXXXXXXXXTPNSGDLATETKDIQKPDEPQPGETQAESPLPEALQPE 125
           LLGVS                 TPNSGDLATETKDIQKPDEPQPGETQAESPLPEALQPE
Sbjct: 66  LLGVSALPLLRAREAAAAAAVATPNSGDLATETKDIQKPDEPQPGETQAESPLPEALQPE 125

Query: 126 SSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLYGTSQQEKKALESVVSSMESKLAENEA 185
           SSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLYGTSQQEKKALESVVSSMESKLAENEA
Sbjct: 126 SSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLYGTSQQEKKALESVVSSMESKLAENEA 185

Query: 186 AISLMRENYEKRLLDQQTAQKKQAMKFQEQEASLLDQXXXXXXXXXXXXEEFRREKTXXX 245
           AISLMRENYEKRLLDQQTAQKKQAMKFQEQEASLLDQ            EEFRREKT   
Sbjct: 186 AISLMRENYEKRLLDQQTAQKKQAMKFQEQEASLLDQLSSTKKTVTSLSEEFRREKTLAE 245

Query: 246 XXXXXXXXXXXXXXQAGDDKDVLEAKLKEKLGDVNILQEKVSLLSQEIDNKGIRIREXXX 305
                         QAGDDKDVLEAKLKEKLGDVNILQEKVSLLSQEIDNKGIRIRE   
Sbjct: 246 ELREEIRRLESSLAQAGDDKDVLEAKLKEKLGDVNILQEKVSLLSQEIDNKGIRIRELSS 305

Query: 306 XXXXKEADYRNLCSFSDQTKESLELAEAKIQQLEEEVHRTRNXXXXXXXXXXXXNEELQA 365
               KEADYRNLCSFSDQTKESLELAEAKIQQLEEEVHRTRN            NEELQA
Sbjct: 306 LLSSKEADYRNLCSFSDQTKESLELAEAKIQQLEEEVHRTRNDLSSKISSIDLLNEELQA 365

Query: 366 LNSAKNEAEEKLSELTKDYTDLKXXXXXXXXXXXXXXXXKDNMIKQXXXXXXXXXXXXXX 425
           LNSAKNEAEEKLSELTKDYTDLK                KDNMIKQ              
Sbjct: 366 LNSAKNEAEEKLSELTKDYTDLKASSEARESRNSELLLEKDNMIKQLDGKLSDALSDSSK 425

Query: 426 XRENIAALNKELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDEANRM 485
            RENIAALNKELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDEANRM
Sbjct: 426 DRENIAALNKELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDEANRM 485

Query: 486 NQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNE 545
           NQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNE
Sbjct: 486 NQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNE 545

Query: 546 LASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQLQMDSEARKAL 605
           LASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQLQMDSEARKAL
Sbjct: 546 LASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQLQMDSEARKAL 605

Query: 606 EADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKALAEQQKITTEAHENT 665
           EADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKALAEQQKITTEAHENT
Sbjct: 606 EADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKALAEQQKITTEAHENT 665

Query: 666 EDAQNLISRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASP 725
           EDAQNLISRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASP
Sbjct: 666 EDAQNLISRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASP 725

Query: 726 EVSQAPDEQPVNDNQNTSKVAAGSQY 751
           EVSQAPDEQPVNDNQNTSKVAAGSQY
Sbjct: 726 EVSQAPDEQPVNDNQNTSKVAAGSQY 751



>Os05g0180400 Prefoldin domain containing protein
          Length = 656

 Score =  490 bits (1262), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 314/653 (48%), Positives = 407/653 (62%), Gaps = 20/653 (3%)

Query: 100 DIQKPDEPQPGETQAESPLPEALQPESSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLY 159
           D  K +E QP E  AE  L E   P    P        NPL+GLLNAIAV ASGV AGL+
Sbjct: 2   DTVKTEETQPEEPSAEESLAEVKVP----PAV------NPLAGLLNAIAVIASGVFAGLF 51

Query: 160 GTSQQEKKALESVVSSMESKLAENEAAISLMRENYEKRLLDQQTAQKKQAMKFQEQEASL 219
           G SQ+EK+AL+S VS+ME KLAENEAA+S++RENYEK++ ++   QKKQA  FQE+EASL
Sbjct: 52  GASQREKEALQSTVSTMEIKLAENEAAMSMLRENYEKQIWNEHAEQKKQARMFQEKEASL 111

Query: 220 LDQXXXXXXXXXXXXEEFRREKTXXXXXXXXXXXXXXXXXQAGDDKDVLEAKLKEKLGDV 279
           LDQ            EE RREK                  QA DDK V E KL+EKL  +
Sbjct: 112 LDQLTLTKRTVTSLNEEVRREKELVEQLKQEIHRLKSSIAQAEDDKHVFEGKLREKLEAL 171

Query: 280 NILQEKVSLLSQEIDNKGIRIREXXXXXXXKEADYRNLCSFSDQTKESLELAEAKIQQLE 339
           + LQ+KV+LLSQE++ K   IRE       KE DY+ L    ++T+ SLE A++KI+QLE
Sbjct: 172 DSLQDKVNLLSQEVNAKEEAIRELSSSLSSKEEDYQKLQLIYNETEASLEYADSKIEQLE 231

Query: 340 EEVHRTRNXXXXXXXXXXXXNEELQALNSAKNEAEEKLSELTKDYTDLKXXXXXXXXXXX 399
           E    T++            N+E+Q L +A+  AEEK+SEL K Y DL            
Sbjct: 232 EGYSATKDDLNSKMCSIDSLNKEVQTLYTAQTGAEEKISELKKQYADLAAASELRASCDS 291

Query: 400 XXXXXKDNMIKQXXXXXXXXXXXXXXXRENIAALNKELDATKAMLENEVAAVKSLRESLQ 459
                KDN++ Q               +  IA LN ELD  + ML+NE  A K L E LQ
Sbjct: 292 ELLIEKDNLLNQLEEKLSAALSDTSKNKIIIAELNNELDTNRTMLDNEAEAHKKLSEILQ 351

Query: 460 STEEALTDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSK 519
           STE ALTD R +V  LS EL+     NQ L+ QI+KL DE N  ++ LTNK+ E E+VSK
Sbjct: 352 STEGALTDYRDKVFNLSEELNRVKISNQQLITQITKLTDESNIAKQVLTNKIAEAEAVSK 411

Query: 520 ALSDELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLDVFKKLESTSQELVDERK 579
            LSDEL SV++++ K QE+L+ TSN+L S +EAR++L KELLD +KKLES + ELV ERK
Sbjct: 412 VLSDELASVRDVLQKTQEKLDVTSNQLVSTMEAREDLNKELLDAYKKLESATDELVRERK 471

Query: 580 TVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELEETNSRKDT 639
              TLNRELEALV+Q  ++SEAR+AL+ADLDE T S  E++ S   LS+ L+  NSR  +
Sbjct: 472 INATLNRELEALVEQSIVESEARQALQADLDEVTNSQKEVDESTQFLSERLDSANSRISS 531

Query: 640 LEAEKKMLSKALAEQQKITTEAHENTEDAQNLISRLQTEKESFEMRARHLEEELALAKGE 699
           +E EK+MLS+AL +Q++ T EA ++ EDAQNL+  + TE+E+FE  ++ LEEELA AKGE
Sbjct: 532 IEQEKEMLSEALEQQKRSTMEAQKDMEDAQNLMRMIGTERENFETMSKKLEEELATAKGE 591

Query: 700 ILRLRRQISTS---RSQKAKTLPNTNASPEVSQAPDEQPVND-NQNTSKVAAG 748
           ILRLRRQIS S   R++ A+T   +N S      P EQ VND +Q+++   AG
Sbjct: 592 ILRLRRQISASGYLRTELAETSVTSNTSQ-----P-EQDVNDPDQSSNNTGAG 638



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.302    0.120    0.296 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,110,931
Number of extensions: 535805
Number of successful extensions: 4290
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 4252
Number of HSP's successfully gapped: 13
Length of query: 766
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 657
Effective length of database: 11,344,475
Effective search space: 7453320075
Effective search space used: 7453320075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 160 (66.2 bits)