BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0132000 Os01g0132000|AB059238
         (100 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0132000  Similar to Wound-induced protease inhibitor (W...   177   1e-45
Os01g0131900  Similar to Wound-induced protease inhibitor (W...   153   3e-38

>Os01g0132000 Similar to Wound-induced protease inhibitor (WIP1)
          Length = 100

 Score =  177 bits (450), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 88/100 (88%)

Query: 1   MKSSTXXXXXXXXXXXXMGIFAAVAKENAVGESKAIDINPGQLKCCSNCNFSFSGLYTCD 60
           MKSST            MGIFAAVAKENAVGESKAIDINPGQLKCCSNCNFSFSGLYTCD
Sbjct: 1   MKSSTLLVILAVQAALIMGIFAAVAKENAVGESKAIDINPGQLKCCSNCNFSFSGLYTCD 60

Query: 61  DIVKKCDPVCKKCAVVKTYPVKMFKCTDTFLGMCGPPCKH 100
           DIVKKCDPVCKKCAVVKTYPVKMFKCTDTFLGMCGPPCKH
Sbjct: 61  DIVKKCDPVCKKCAVVKTYPVKMFKCTDTFLGMCGPPCKH 100



>Os01g0131900 Similar to Wound-induced protease inhibitor (WIP1)
          Length = 101

 Score =  153 bits (386), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 82/101 (81%), Gaps = 1/101 (0%)

Query: 1   MKSSTXXXXXXXXXXXXMGIFAAVAKENAVGESKA-IDINPGQLKCCSNCNFSFSGLYTC 59
           MKSST            MGIFAAVAKENAVGESK   + N G+LKCCSNCNFSFSGLYTC
Sbjct: 1   MKSSTLMVILVLQAVLVMGIFAAVAKENAVGESKGNTETNGGKLKCCSNCNFSFSGLYTC 60

Query: 60  DDIVKKCDPVCKKCAVVKTYPVKMFKCTDTFLGMCGPPCKH 100
           +D+VKKCDPVCK CAVVKT+PVK FKCTDTFLGMCGPPCKH
Sbjct: 61  EDVVKKCDPVCKSCAVVKTHPVKKFKCTDTFLGMCGPPCKH 101



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.324    0.136    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,963,111
Number of extensions: 97793
Number of successful extensions: 214
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 213
Number of HSP's successfully gapped: 2
Length of query: 100
Length of database: 17,035,801
Length adjustment: 69
Effective length of query: 31
Effective length of database: 13,433,035
Effective search space: 416424085
Effective search space used: 416424085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)