Os01g0131900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wound-induced protease inhibitor (WIP1).
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Os01g0131900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Wound-induced protease inhibitor (WIP1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 777.33 | 1.31 | 7.58 | -2.36 | 0.199 | 4.5 | -3.67 | 1.28 | 0.497 | 19.1 | 5.509 | 1278 | -- | -- |
| 777.65 | 1.3 | 7.56 | -2.33 | 0.177 | 4.46 | -3.63 | -- | 0.486 | 18.8 | 5.309 | 1122 | -- | -- |
| 803.62 | 1.32 | 7.57 | -2.29 | 0.0271 | 4.48 | -- | -0.569 | 0.407 | 6.54 | 5 | 936 | -- | -- |
| 802.01 | 1.32 | 7.59 | -2.34 | 0.217 | 4.53 | -- | -- | 0.388 | 13 | 4.725 | 935 | -- | -- |
| 803.33 | 1.32 | 7.55 | -2.29 | -- | 4.39 | -- | -1.24 | 0.442 | -- | 5 | 935 | -- | -- |
| 945.62 | 1.44 | 7.62 | -3.33 | 0.32 | -- | -3.62 | -- | 0.248 | 19.9 | -- | -- | -- | -- |
| 980.19 | 1.47 | 7.63 | -3.24 | 0.385 | -- | -- | -- | 0.238 | 22.4 | -- | -- | -- | -- |
| 803.74 | 1.32 | 7.57 | -2.33 | -- | 4.56 | -- | -- | 0.432 | -- | 5.054 | 935 | -- | -- |
| 923.78 | 1.42 | 7.51 | -- | 0.437 | 5.75 | -- | -- | 0.693 | 12.9 | 4.678 | 936 | -- | -- |
| 989.26 | 1.47 | 7.62 | -3.24 | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
| 1257.61 | 1.66 | 7.55 | -- | 0.37 | -- | -- | -- | 0.6 | 21.8 | -- | -- | -- | -- |
| 932.36 | 1.42 | 7.51 | -- | -- | 5.75 | -- | -- | 0.712 | -- | 5 | 936 | -- | -- |
| 1265.8 | 1.66 | 7.54 | -- | -- | -- | -- | -- | 0.599 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 772.31 | wind | 5 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 2 | 772.49 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 17 |
| 3 | 772.60 | wind | 5 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 7 | 773.85 | wind | 5 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 15 | 775.17 | wind | 5 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 17 | 775.48 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 19 | 775.50 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 22 | 775.65 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 34 | 776.86 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 44 | 778.06 | wind | 7 | 1440 | > th | dose independent | rect. | 19 | 21 |
| 48 | 778.28 | wind | 7 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 59 | 779.05 | wind | 5 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 69 | 779.28 | wind | 7 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 73 | 779.51 | wind | 7 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 77 | 780.11 | wind | 7 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 97 | 780.90 | wind | 5 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 176 | 782.61 | wind | 5 | 1440 | > th | dose dependent | sin | 3 | NA |
| 177 | 782.64 | wind | 5 | 1440 | > th | dose dependent | no | NA | NA |
| 192 | 782.91 | wind | 5 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 200 | 783.12 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 221 | 783.55 | wind | 7 | 1440 | < th | dose independent | rect. | 4 | 21 |
| 230 | 783.80 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 247 | 784.20 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 21 |
| 264 | 784.41 | wind | 7 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 279 | 784.60 | wind | 5 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 300 | 784.82 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 326 | 784.90 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 333 | 784.97 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 336 | 784.99 | wind | 7 | 1440 | < th | dose independent | no | NA | NA |
| 379 | 785.27 | wind | 7 | 1440 | > th | dose independent | no | NA | NA |
| 390 | 785.30 | wind | 7 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 543 | 786.71 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 562 | 786.91 | wind | 7 | 720 | > th | dose independent | sin | 7 | NA |
| 565 | 786.93 | wind | 5 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 572 | 786.98 | wind | 5 | 1440 | > th | dose dependent | rect. | 2 | 14 |
| 748 | 789.53 | wind | 7 | 1440 | > th | dose independent | sin | 4 | NA |
| 751 | 789.57 | wind | 7 | 1440 | < th | dose independent | sin | 3 | NA |
| 950 | 791.50 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 970 | 791.65 | wind | 7 | 720 | < th | dose independent | sin | 7 | NA |