Os01g0132000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wound-induced protease inhibitor (WIP1).
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Os01g0132000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Wound-induced protease inhibitor (WIP1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1430.16 | 1.78 | 7.61 | -4.79 | 2.58 | -6.45 | 1.82 | -2.15 | 0.77 | 11.6 | 5.112 | 690 | 21.7 | 19.9 |
| 1433.1 | 1.76 | 7.57 | -4.8 | 2.58 | -6.15 | 1.5 | -- | 0.841 | 11.2 | 5.1 | 672 | 21.6 | 19.9 |
| 1434.74 | 1.76 | 7.57 | -4.8 | 2.5 | -6.28 | -- | 0.457 | 0.793 | 11.6 | 5.102 | 689 | 21.7 | 20 |
| 1434.5 | 1.76 | 7.58 | -4.76 | 2.46 | -6.2 | -- | -- | 0.784 | 11.4 | 5.08 | 690 | 21.6 | 20.1 |
| 1472.74 | 1.79 | 7.61 | -4.64 | -- | -5.34 | -- | 0.0277 | 0.855 | -- | 5.199 | 1152 | 21.1 | 21.5 |
| 1739.67 | 1.96 | 7.62 | -5.96 | 0.216 | -- | -4.03 | -- | 0.829 | 19.8 | -- | -- | -- | -- |
| 1752.22 | 1.96 | 7.64 | -5.89 | 0.767 | -- | -- | -- | 0.806 | 0.991 | -- | -- | -- | -- |
| 1470.93 | 1.79 | 7.62 | -4.65 | -- | -5.3 | -- | -- | 0.837 | -- | 5.182 | 1129 | 21.3 | 21.9 |
| 1976.92 | 2.07 | 7.55 | -- | 2.74 | -7.42 | -- | -- | 1.09 | 11.4 | 4.801 | 687 | 22 | 21.1 |
| 1788.77 | 1.98 | 7.62 | -5.86 | -- | -- | -- | -- | 0.821 | -- | -- | -- | -- | -- |
| 2665.31 | 2.41 | 7.49 | -- | 0.673 | -- | -- | -- | 1.46 | 0.621 | -- | -- | -- | -- |
| 1983.72 | 2.07 | 7.54 | -- | -- | -7.19 | -- | -- | 1.19 | -- | 5.2 | 1121 | 20.7 | 22.9 |
| 2693.73 | 2.42 | 7.48 | -- | -- | -- | -- | -- | 1.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1441.52 | wind | 5 | 720 | < th | dose independent | rect. | 22 | 20 |
| 3 | 1445.06 | wind | 5 | 720 | < th | dose independent | rect. | 22 | 18 |
| 4 | 1445.07 | wind | 5 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 20 | 1451.94 | wind | 5 | 720 | > th | dose independent | rect. | 20 | 22 |
| 21 | 1452.32 | wind | 5 | 720 | > th | dose independent | rect. | 20 | 20 |
| 24 | 1453.05 | wind | 5 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 35 | 1456.02 | wind | 5 | 720 | > th | dose independent | rect. | 17 | 23 |
| 58 | 1459.92 | wind | 5 | 720 | > th | dose independent | rect. | 14 | 23 |
| 70 | 1461.49 | wind | 5 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 71 | 1461.53 | wind | 5 | 720 | > th | dose dependent | no | NA | NA |
| 80 | 1462.44 | wind | 5 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 81 | 1462.48 | wind | 5 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 90 | 1463.51 | wind | 5 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 95 | 1463.86 | wind | 5 | 720 | < th | dose independent | rect. | 13 | 22 |
| 103 | 1464.55 | wind | 5 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 156 | 1466.51 | wind | 5 | 720 | > th | dose independent | rect. | 4 | 23 |
| 161 | 1466.64 | wind | 5 | 720 | > th | dose independent | rect. | 6 | 23 |
| 168 | 1466.80 | wind | 5 | 720 | > th | dose independent | no | NA | NA |
| 179 | 1467.45 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 14 |
| 191 | 1468.16 | wind | 5 | 720 | > th | dose independent | rect. | 24 | 23 |
| 199 | 1468.52 | wind | 5 | 720 | < th | dose independent | rect. | 17 | 23 |
| 228 | 1469.68 | wind | 5 | 720 | < th | dose independent | rect. | 5 | 23 |
| 236 | 1469.91 | wind | 5 | 720 | < th | dose independent | rect. | 3 | 23 |
| 249 | 1470.82 | wind | 5 | 720 | < th | dose independent | no | NA | NA |
| 278 | 1472.27 | wind | 7 | 720 | < th | dose independent | rect. | 7 | 18 |
| 319 | 1474.14 | wind | 5 | 1440 | > th | dose dependent | sin | 3 | NA |
| 329 | 1474.67 | wind | 7 | 720 | < th | dose independent | sin | 7 | NA |
| 338 | 1475.08 | wind | 5 | 720 | > th | dose independent | rect. | 11 | 23 |
| 450 | 1478.86 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 10 |
| 522 | 1480.75 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 830 | 1486.90 | wind | 5 | 720 | > th | dose independent | sin | 3 | NA |
| 864 | 1487.66 | wind | 7 | 1440 | < th | dose independent | rect. | 11 | 19 |