BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0105900 Os01g0105900|AK066907
         (379 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0105900  PfkB domain containing protein                      743   0.0  
Os10g0573000  Similar to Carbohydrate kinase-like protein          65   7e-11

>Os01g0105900 PfkB domain containing protein
          Length = 379

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/379 (96%), Positives = 366/379 (96%)

Query: 1   MGAEAEHRMXXXXXXXXXXXXXVGRTDGDAPPMVLGLQLSALIDHVARVDWSLLNRIPGD 60
           MGAEAEHRM             VGRTDGDAPPMVLGLQLSALIDHVARVDWSLLNRIPGD
Sbjct: 1   MGAEAEHRMSPSPAPAPAPPTPVGRTDGDAPPMVLGLQLSALIDHVARVDWSLLNRIPGD 60

Query: 61  RGGSQQVCIEELNHILAEVNAQILPCRDDLSSIRTIAGGSVANTIRGLSAGFGISTGIIG 120
           RGGSQQVCIEELNHILAEVNAQILPCRDDLSSIRTIAGGSVANTIRGLSAGFGISTGIIG
Sbjct: 61  RGGSQQVCIEELNHILAEVNAQILPCRDDLSSIRTIAGGSVANTIRGLSAGFGISTGIIG 120

Query: 121 ACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQAN 180
           ACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQAN
Sbjct: 121 ACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQAN 180

Query: 181 EFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLL 240
           EFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLL
Sbjct: 181 EFKKEDFKGSKWLVVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLL 240

Query: 241 ETGNIDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQ 300
           ETGNIDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQ
Sbjct: 241 ETGNIDLCFANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQ 300

Query: 301 VAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPENW 360
           VAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPENW
Sbjct: 301 VAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPENW 360

Query: 361 QWMYKQMNASGLLLPDLKN 379
           QWMYKQMNASGLLLPDLKN
Sbjct: 361 QWMYKQMNASGLLLPDLKN 379



>Os10g0573000 Similar to Carbohydrate kinase-like protein
          Length = 458

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 127/322 (39%), Gaps = 30/322 (9%)

Query: 27  DGDAPPM------VLGLQLSALIDHVARVDWSLLNRIPGDRGGSQQVCIEELNHILAEVN 80
           D  APP       VLGL   A++D    VD   L+R+   +G  + V  EE   +L  + 
Sbjct: 90  DLHAPPSGPERWDVLGLG-QAMVDFSGMVDDEFLHRLGIQKGTRKVVNHEERGRVLRAM- 147

Query: 81  AQILPCRDDLSSIRTIAGGSVANTIRGLSA-GFGIST-------GIIGACGDDSQGVLFV 132
                   D  S +  AGGS++N++  LS  G   ST        + G+ G D  G  + 
Sbjct: 148 --------DGCSYKAAAGGSLSNSLVALSRLGSSRSTNYPELRIAMAGSVGSDPLGSFYR 199

Query: 133 SNMSFSGVDLTRLRTKKGHTAQCACLVDASGNRTMRPCLSSAVKLQANEFKKEDFKGSKW 192
           + +  + +       K G T     L      RTM     ++  L  +         S  
Sbjct: 200 AKLRRANLHFLSKPVKDGTTGTVIVLTTPDAQRTMLAYQGTSSTLSYDSDLASLVSKSNV 259

Query: 193 LVVRYARQNMEQILEAIRIA----KQEGLSVSLDLASFEMVRDYRTQLIDLLETGNIDLC 248
           ++V      +   +EAI+ A     + G  +++  +    ++       D++ T   D+ 
Sbjct: 260 VIVEGYLFELPHTIEAIKQACEDAHKNGSLIAVTASDVSCIKRCYNDFWDIV-TNYADIL 318

Query: 249 FANEDEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESN 308
           FAN +EAR       T  P  A  +L+       VT    G       + + +       
Sbjct: 319 FANANEARAFCELSSTDSPMSAARYLSHSVPLVSVTDGVHGSYIGVKGEAIYIPPP-PCV 377

Query: 309 AVDATGAGDLFASGFLYGLVKG 330
            +D  GAGD +ASG LYG+++G
Sbjct: 378 PIDTCGAGDAYASGILYGILRG 399



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,784,530
Number of extensions: 522564
Number of successful extensions: 1238
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1238
Number of HSP's successfully gapped: 2
Length of query: 379
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 276
Effective length of database: 11,657,759
Effective search space: 3217541484
Effective search space used: 3217541484
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)