Os01g0105900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PfkB domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0105900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : PfkB domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.25 | 0.283 | 12.4 | 0.588 | 0.999 | -0.302 | 0.735 | -0.732 | 0.293 | 23.2 | 3.155 | 117 | -- | -- |
| 37.1 | 0.284 | 12.3 | 0.592 | 0.998 | -0.349 | 0.658 | -- | 0.301 | 23.3 | 3.318 | 129 | -- | -- |
| 38.39 | 0.289 | 12.3 | 0.575 | 0.992 | -0.323 | -- | -0.494 | 0.297 | 23.3 | 3.934 | 125 | -- | -- |
| 38.87 | 0.29 | 12.3 | 0.579 | 0.995 | -0.338 | -- | -- | 0.305 | 23.3 | 3.778 | 128 | -- | -- |
| 77.23 | 0.409 | 12.3 | 0.878 | -- | -0.99 | -- | -0.42 | 0.32 | -- | 4.648 | 719 | -- | -- |
| 39.33 | 0.294 | 12.3 | 0.514 | 0.999 | -- | 0.663 | -- | 0.321 | 22.5 | -- | -- | -- | -- |
| 41.14 | 0.3 | 12.3 | 0.487 | 0.996 | -- | -- | -- | 0.319 | 22.5 | -- | -- | -- | -- |
| 76.69 | 0.408 | 12.3 | 0.759 | -- | -1.07 | -- | -- | 0.231 | -- | 4.5 | 712 | -- | -- |
| 46.93 | 0.319 | 12.4 | -- | 1.01 | -0.145 | -- | -- | 0.253 | 22.9 | 3.871 | 100 | -- | -- |
| 102.03 | 0.472 | 12.3 | 0.505 | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
| 47.39 | 0.322 | 12.3 | -- | 0.999 | -- | -- | -- | 0.265 | 22.6 | -- | -- | -- | -- |
| 91.49 | 0.445 | 12.3 | -- | -- | -0.836 | -- | -- | 0.173 | -- | 4.3 | 694 | -- | -- |
| 108.75 | 0.487 | 12.3 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.80 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 2 | 34.88 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 4 | 34.93 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 5 | 34.98 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 8 | 35.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 10 | 35.20 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 11 | 35.22 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 14 | 35.27 | wind | 5.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 20 | 35.30 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 22 | 35.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 28 | 35.34 | wind | 1.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 39 | 35.41 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 40 | 35.41 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 53 | 35.47 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 67 | 35.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 71 | 35.53 | wind | 5.0 | 90 | < th | dose dependent | rect. | 21 | 16 |
| 72 | 35.53 | wind | 5.0 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 79 | 35.55 | wind | 3.0 | 90 | < th | dose dependent | rect. | 9 | 16 |
| 83 | 35.57 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 84 | 35.57 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 99 | 35.62 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 126 | 35.67 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 132 | 35.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 134 | 35.69 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 139 | 35.70 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 144 | 35.70 | wind | 5.0 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 150 | 35.71 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 170 | 35.76 | wind | 5.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 188 | 35.79 | wind | 5.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 189 | 35.79 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 190 | 35.79 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 200 | 35.79 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 206 | 35.80 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 207 | 35.80 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 216 | 35.82 | wind | 3.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 217 | 35.82 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 221 | 35.82 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 230 | 35.83 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 246 | 35.84 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 288 | 35.87 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 298 | 35.88 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 19 |
| 303 | 35.88 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 335 | 35.91 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 337 | 35.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 339 | 35.91 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 17 |
| 342 | 35.91 | wind | 3.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 360 | 35.92 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 379 | 35.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 386 | 35.93 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 411 | 35.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 419 | 35.94 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 420 | 35.94 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 442 | 35.95 | wind | 5.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 449 | 35.95 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 21 |
| 493 | 35.96 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 16 |
| 497 | 35.96 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 499 | 35.96 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 521 | 35.96 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 550 | 35.97 | wind | 9.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 648 | 35.98 | atmosphere | 1010.0 | 43200 | < th | dose dependent | no | NA | NA |
| 651 | 35.98 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 721 | 35.98 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 737 | 35.99 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 13 |
| 741 | 35.99 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 21 |
| 794 | 36.00 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 802 | 36.00 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 850 | 36.01 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 857 | 36.01 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 984 | 36.03 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 20 |
| 991 | 36.03 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 995 | 36.03 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 23 | 2 |