BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0105900 Os01g0105900|AK066907
(379 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19600.1 | chr1:6779085-6780898 FORWARD LENGTH=356 499 e-142
AT5G03300.1 | chr5:796573-798997 FORWARD LENGTH=346 74 1e-13
AT3G09820.1 | chr3:3012122-3014624 FORWARD LENGTH=345 69 6e-12
AT4G27600.1 | chr4:13782753-13785005 REVERSE LENGTH=472 66 3e-11
AT1G17160.1 | chr1:5867678-5869215 FORWARD LENGTH=380 57 2e-08
AT2G31390.1 | chr2:13383635-13386116 REVERSE LENGTH=326 51 1e-06
AT1G06020.1 | chr1:1824548-1826101 FORWARD LENGTH=346 50 3e-06
AT1G06030.1 | chr1:1826880-1828130 FORWARD LENGTH=330 49 4e-06
>AT1G19600.1 | chr1:6779085-6780898 FORWARD LENGTH=356
Length = 355
Score = 499 bits (1286), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/348 (69%), Positives = 287/348 (82%), Gaps = 5/348 (1%)
Query: 32 PMVLGLQLSALIDHVARVDWSLLNRIPGDRGGSQQVCIEELNHILAEVNAQILPCRDDLS 91
P+VLGLQ +ALID+VA VDWSLL++IPGDRGGS V +EL H+L E++A I ++
Sbjct: 13 PLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHMLKELDAHI-----SVA 67
Query: 92 SIRTIAGGSVANTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKGH 151
++ +AGGSV NT+RGLS GFG++TGIIGA GDD QG LFVSNM FSGV ++RLR KKG
Sbjct: 68 PLKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGS 127
Query: 152 TAQCACLVDASGNRTMRPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQNMEQILEAIRI 211
TAQC CLVD SGNRTMRPCLSSAVK+QA+E KEDF GSKWLV+RYA N++ I AIR
Sbjct: 128 TAQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGSKWLVLRYAVLNLQVIQAAIRF 187
Query: 212 AKQEGLSVSLDLASFEMVRDYRTQLIDLLETGNIDLCFANEDEARELLGGELTFDPEEAL 271
AKQEGLSVSLDLASFEMVR+ +++L LLE+GNIDLCFANEDEA ELL GE PE AL
Sbjct: 188 AKQEGLSVSLDLASFEMVRNSKSELRQLLESGNIDLCFANEDEAAELLRGEQEAGPEAAL 247
Query: 272 AFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAGDLFASGFLYGLVKGL 331
FL ++C+WAVVTL SKGCIAKH K+VV ++A GE+ A DATGAGDLFASGFLYGL+KGL
Sbjct: 248 EFLGRHCRWAVVTLGSKGCIAKHDKEVVHISAIGETVATDATGAGDLFASGFLYGLIKGL 307
Query: 332 ALEECCKVGACSGGSVVRALGGEVRPENWQWMYKQMNASGLLLPDLKN 379
+LEECCKVG+CSGGSV+RALGGEV PENWQWM+KQ+ GL +PD+ N
Sbjct: 308 SLEECCKVGSCSGGSVIRALGGEVTPENWQWMHKQLQLKGLPVPDIHN 355
>AT5G03300.1 | chr5:796573-798997 FORWARD LENGTH=346
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 44/316 (13%)
Query: 73 NHILAEVNAQILPCRDDLSS---IRTIAGGSVANTIRGLSAGFGI--STGIIGACGDDSQ 127
N ILAE + LP D++SS + IAGG+ N+I+ I +T +G+ G D
Sbjct: 39 NAILAE--DKHLPMYDEMSSKFNVEYIAGGATQNSIKVAQWMLQIPGATSYMGSIGKDKY 96
Query: 128 GVLFVSNMSFSGVDLTRLRTKKGHTAQC-ACLVDASGNRTMRPCLSSAVKLQANEFKKED 186
G + + +GV++ + T C C+V G R++ LS+A + + KK +
Sbjct: 97 GEAMKKDATAAGVNVHYYEDESAPTGTCGVCVV--GGERSLIANLSAANCYKVDHLKKPE 154
Query: 187 FKGSKWLVVRYARQN------MEQILEAIRIAKQEGLS----VSLDL-ASF--EMVRDYR 233
W +V A+ + E+I++ + + +++L A F E +D +
Sbjct: 155 ----NWALVEKAKFYYIAGFFLTVSPESIQLVSEHAAANNKVFTMNLSAPFICEFFKDVQ 210
Query: 234 TQLIDLLETGNIDLCFANEDEAREL--LGGELTFDPEE---ALAFLAK----YCKWAVVT 284
+ + + D F NE EAR + G T D E+ ++ L K Y + V+T
Sbjct: 211 EKFLPYM-----DFVFGNETEARTFSRVHGWETEDVEQIAIKISQLPKATGTYKRTTVIT 265
Query: 285 L-ASKGCIAKHGK-QVVQVAATGESNAVDATGAGDLFASGFLYGLVKGLALEECCKVGAC 342
A +A+ GK + V + VD GAGD F GF+ LVK ++EEC K G C
Sbjct: 266 QGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAG-C 324
Query: 343 SGGSVVRALGGEVRPE 358
+VV G PE
Sbjct: 325 YASNVVIQRSGCTYPE 340
>AT3G09820.1 | chr3:3012122-3014624 FORWARD LENGTH=345
Length = 344
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 150/348 (43%), Gaps = 52/348 (14%)
Query: 40 SALIDHVARVDWSLLNRIPGDRGGSQQVCIEELNHILAEVNAQILPCRDDLS---SIRTI 96
+ L+D A VD L++ I+ N ILAE + LP D++S ++ I
Sbjct: 15 NPLLDVSAVVDQQFLDKYD----------IKLNNAILAE--DKHLPMYDEMSQKFNVEYI 62
Query: 97 AGGSVANTIRGLSAGFGI--STGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKGHTAQ 154
AGG+ N+I+ + +T +G+ G D G + + +GV + + T
Sbjct: 63 AGGATQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGT 122
Query: 155 CACLVDASGNRTMRPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQN------MEQILEA 208
C V G R++ LS+A + KK + W +V A+ + E+
Sbjct: 123 CGVCV-LGGERSLIANLSAANCYKVEHLKKPE----NWALVEKAKFYYIAGFFLTVSPES 177
Query: 209 IRIAKQEGLS----VSLDL-ASF--EMVRDYRTQLIDLLETGNIDLCFANEDEAREL--L 259
I++ ++ + +++L A F E +D + + + + D F NE EAR +
Sbjct: 178 IQLVREHAAANNKVFTMNLSAPFICEFFKDVQEKCLPYM-----DYIFGNETEARTFSRV 232
Query: 260 GGELTFDPEE---ALAFLAK----YCKWAVVTL-ASKGCIAKHGK-QVVQVAATGESNAV 310
G T D E+ ++ L K Y + V+T A +A+ GK + V + V
Sbjct: 233 HGWETDDVEQIAIKMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLV 292
Query: 311 DATGAGDLFASGFLYGLVKGLALEECCKVGACSGGSVVRALGGEVRPE 358
D GAGD F GFL LV G +EEC + G C +VV G PE
Sbjct: 293 DTNGAGDAFVGGFLSQLVHGKGIEECVRAG-CYASNVVIQRSGCTYPE 339
>AT4G27600.1 | chr4:13782753-13785005 REVERSE LENGTH=472
Length = 471
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 48/365 (13%)
Query: 34 VLGLQLSALIDHVARVDWSLLNRIPGDRGGSQQVCIEELNHILAEVNAQILPCRDDLSSI 93
VLGL A++D VD L ++ ++G + + EE +L + D S
Sbjct: 123 VLGLG-QAMVDFSGVVDDEFLKKLGLEKGTRKLINHEERGKLLQAM---------DGCSY 172
Query: 94 RTIAGGSVANTIRGLSAGFG--------ISTGIIGACGDDSQGVLFVSNMSFSGVDLTRL 145
+ AGGS++NT+ L A G ++ + G+ G D G + + + + V+
Sbjct: 173 KAAAGGSLSNTLVAL-ARLGSQSICDRPLNVAMAGSIGGDPLGSFYGTKLRRANVNFLSA 231
Query: 146 RTKKGHTAQCACLVDASGNRTM------------RPCLSSAVKLQANEFKKEDFKGSKWL 193
K G T L RTM CL+S + + N F E +
Sbjct: 232 PIKDGTTGTVIVLTTPDAQRTMLAYQGTSSVVNYDSCLASLIA-KTNVFVVEGYLFELPD 290
Query: 194 VVRYARQNMEQILEAIRIAKQEGLSVSLDLASFEMVRDYRTQLIDLLETGNI-DLCFANE 252
+R I +A A + G V++ + + + D++ GN D+ FAN
Sbjct: 291 TIR-------TITKACEEAHRNGALVAVTASDVSCIERHYDDFWDIV--GNYADIVFANS 341
Query: 253 DEARELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDA 312
DEAR P A +++ + + VT G + + + + VD
Sbjct: 342 DEARAFCHFSAEESPISATRYMSHFVPFVSVTDGINGSYIGVKGEAIYIPPS-PCVPVDT 400
Query: 313 TGAGDLFASGFLYGLVKGLA-LEECCKVGACSGGSVVRALGGEVRPENWQWMYK----QM 367
GAGD +ASG LYG+++G++ L+ + A +VV G +R ++ + + ++
Sbjct: 401 CGAGDAYASGILYGILRGVSDLKGMGDMAATIAATVVGQQGTRLRVQDAVELARSHAFRL 460
Query: 368 NASGL 372
N SG+
Sbjct: 461 NGSGV 465
>AT1G17160.1 | chr1:5867678-5869215 FORWARD LENGTH=380
Length = 379
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 17/268 (6%)
Query: 94 RTIAGGSVANTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSG--VDLTRLRTKKGH 151
+T+AGG AN A T +G G+D+ G L + G V L +R+
Sbjct: 101 QTLAGGKGANQ-AACGAKLMYPTYFVGRLGEDAHGKLIAEALGDDGCGVHLDYVRSVNNE 159
Query: 152 -TAQCACLVDASGNRTMRPCLSSAVKLQANEFKKEDFKGSKWL-VVRYARQNMEQI-LEA 208
T ++ + G ++ + +K +D + + +V R+ + I ++
Sbjct: 160 PTGHAVVMLQSDGQNSIIIVGGANMKAWPEIMSDDDLEIVRNAGIVLLQREIPDSINIQV 219
Query: 209 IRIAKQEGLSVSLDLASFEMVRDYRTQLIDLLETGNIDLCFANEDEARELLGGEL-TFDP 267
+ K+ G+ V LD+ + +L+D +ID+ NE E L G TF+
Sbjct: 220 AKAVKKAGVPVILDVGGMDT--PIPNELLD-----SIDILSPNETELSRLTGMPTETFEQ 272
Query: 268 -EEALAFLAKY-CKWAVVTLASKG-CIAKHGKQVVQVAATGESNAVDATGAGDLFASGFL 324
+A+A K K +V L SKG + G++ +Q + + VD TGAGD F + F
Sbjct: 273 ISQAVAKCHKLGVKQVLVKLGSKGSALFIQGEKPIQQSIIPAAQVVDTTGAGDTFTAAFA 332
Query: 325 YGLVKGLALEECCKVGACSGGSVVRALG 352
+V+G + EEC + A + V+ G
Sbjct: 333 VAMVEGKSHEECLRFAAAAASLCVQVKG 360
>AT2G31390.1 | chr2:13383635-13386116 REVERSE LENGTH=326
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 100/247 (40%), Gaps = 26/247 (10%)
Query: 98 GGSVANTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKG-HTAQCA 156
GG+ AN +S G + +G GDD G + + +GVD + G TA
Sbjct: 40 GGAPANVAIAVSR-LGGRSAFVGKLGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAF 98
Query: 157 CLVDASGNRTM----RPCLSSAVKLQANEFKKEDFK-------GSKWLVVRYARQNMEQI 205
+ A G+R P S+ + L+ +E + + GS L+V R
Sbjct: 99 VTLRADGDREFMFYRNP--SADMLLRPDELNLDLIRSAKVFHYGSISLIVEPCRSAH--- 153
Query: 206 LEAIRIAKQEGLSVSLDLASFEMV----RDYRTQLIDLLETGNIDLCFANEDEARELLGG 261
L+A+ +AK+ G +S D E + + +TQ++ + + I D E L G
Sbjct: 154 LKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQIMSIWDKAEI---IKVSDVELEFLTG 210
Query: 262 ELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAGDLFAS 321
D E AL K +VTL KGC + K NAVD TGAGD F
Sbjct: 211 SNKIDDETALTLWHPNLKLLLVTLGEKGC-RYYTKTFKGAVDPFHVNAVDTTGAGDSFVG 269
Query: 322 GFLYGLV 328
L +V
Sbjct: 270 ALLNQIV 276
>AT1G06020.1 | chr1:1824548-1826101 FORWARD LENGTH=346
Length = 345
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 98 GGSVANTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKG-HTAQCA 156
GG+ AN +S G +G GDD G + + +GVD + +G TA
Sbjct: 41 GGAPANVAIAVSR-LGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAF 99
Query: 157 CLVDASGNRTM----RPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQNM------EQIL 206
+ + G R P S+ + L+ +E E + +K V Y ++ +
Sbjct: 100 VTLRSDGEREFMFYRNP--SADMLLRPDELNLELIRSAK--VFHYGSISLITEPCRSAHM 155
Query: 207 EAIRIAKQEGLSVSLDLASFEMV----RDYRTQLI------DLLETGNIDLCFANEDEAR 256
+A+ +AK+ G +S D E + + RTQ++ D+++ +++L F E++
Sbjct: 156 KAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENK-- 213
Query: 257 ELLGGELTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAG 316
T D + A++ K +VTL KGC K+ T +AVD TGAG
Sbjct: 214 -------TMDDKTAMSLWHPNLKLLLVTLGEKGC-TYFTKKFHGSVETFHVDAVDTTGAG 265
Query: 317 DLFASGFLYGLV 328
D F L +V
Sbjct: 266 DSFVGALLQQIV 277
>AT1G06030.1 | chr1:1826880-1828130 FORWARD LENGTH=330
Length = 329
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 100/246 (40%), Gaps = 24/246 (9%)
Query: 98 GGSVANTIRGLSAGFGISTGIIGACGDDSQGVLFVSNMSFSGVDLTRLRTKKG-HTAQCA 156
GG+ AN +S G +G GDD G + + + VD + KG TA
Sbjct: 42 GGAPANVAIAVSR-LGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAF 100
Query: 157 CLVDASGNRTM----RPCLSSAVKLQANEFKKEDFKGSKWLVVRYARQNM------EQIL 206
+ + G R P S+ + L+ +E E + +K V Y ++ +
Sbjct: 101 VTLRSDGEREFMFYRNP--SADMLLRPDELNLELIRSAK--VFHYGSISLITEPCRSAHM 156
Query: 207 EAIRIAKQEGLSVSLDLASFEMV----RDYRTQLIDLLETGNIDLCFANEDEARELLGGE 262
+A+ +AK+ G +S D E + + R Q++ + + +I D E L G
Sbjct: 157 KAMEVAKEAGALLSYDPNLREPLWPSPEEARKQIMSIWDKADI---IKVSDVELEFLTGN 213
Query: 263 LTFDPEEALAFLAKYCKWAVVTLASKGCIAKHGKQVVQVAATGESNAVDATGAGDLFASG 322
T D E A++ K +VTL GC + K T +AVD TGAGD F
Sbjct: 214 KTIDDETAMSLWHPNLKLLLVTLGENGC-RYYTKDFHGSVETFHVDAVDTTGAGDSFVGA 272
Query: 323 FLYGLV 328
L +V
Sbjct: 273 LLNQIV 278
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,840,940
Number of extensions: 315254
Number of successful extensions: 778
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 10
Length of query: 379
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 279
Effective length of database: 8,364,969
Effective search space: 2333826351
Effective search space used: 2333826351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)