Os10g0573000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Carbohydrate kinase-like protein.
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Os10g0573000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Carbohydrate kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.32 | 0.359 | 13.8 | -0.0964 | 0.209 | 0.741 | -0.0593 | -0.132 | -0.254 | 17.5 | 76.16 | 1107 | -- | -- |
| 58.31 | 0.356 | 13.8 | -0.0839 | 0.202 | 0.736 | -0.0413 | -- | -0.256 | 17.3 | 77.48 | 1092 | -- | -- |
| 58.29 | 0.356 | 13.8 | -0.0963 | 0.201 | 0.754 | -- | -0.147 | -0.261 | 17.2 | 77.75 | 1092 | -- | -- |
| 58.31 | 0.356 | 13.8 | -0.0865 | 0.203 | 0.74 | -- | -- | -0.259 | 17.2 | 77.66 | 1092 | -- | -- |
| 59.79 | 0.36 | 13.8 | -0.0742 | -- | 0.748 | -- | -0.000996 | -0.263 | -- | 79 | 934 | -- | -- |
| 69.25 | 0.39 | 13.8 | 0.0368 | 0.251 | -- | -0.13 | -- | -0.294 | 20.1 | -- | -- | -- | -- |
| 69.3 | 0.39 | 13.8 | 0.0405 | 0.251 | -- | -- | -- | -0.294 | 20.1 | -- | -- | -- | -- |
| 59.79 | 0.36 | 13.8 | -0.0722 | -- | 0.75 | -- | -- | -0.261 | -- | 79 | 934 | -- | -- |
| 58.49 | 0.356 | 13.8 | -- | 0.2 | 0.729 | -- | -- | -0.254 | 17.2 | 78.54 | 1086 | -- | -- |
| 72.78 | 0.399 | 13.8 | 0.0384 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 69.34 | 0.39 | 13.8 | -- | 0.251 | -- | -- | -- | -0.299 | 20.1 | -- | -- | -- | -- |
| 59.92 | 0.361 | 13.8 | -- | -- | 0.735 | -- | -- | -0.254 | -- | 79.08 | 929 | -- | -- |
| 72.81 | 0.398 | 13.8 | -- | -- | -- | -- | -- | -0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.55 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 8 | 56.89 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 12 | 57.11 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 14 | 57.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 15 | 57.28 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 17 | 57.31 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 19 | 57.37 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 26 | 57.49 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 36 | 57.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 43 | 57.92 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 51 | 58.01 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 54 | 58.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 58 | 58.09 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 62 | 58.15 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 63 | 58.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 11 |
| 80 | 58.26 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 13 |
| 90 | 58.31 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 93 | 58.33 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 101 | 58.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 17 |
| 121 | 58.47 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 144 | 58.56 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 147 | 58.57 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 149 | 58.58 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 162 | 58.63 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 208 | 58.80 | humidity | 50.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 239 | 58.90 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 241 | 58.91 | humidity | 60.0 | 720 | > th | dose independent | rect. | 8 | 12 |
| 249 | 58.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 251 | 58.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 295 | 59.03 | humidity | 80.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 326 | 59.11 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 330 | 59.12 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 345 | 59.15 | humidity | 60.0 | 720 | > th | dose independent | rect. | 24 | 20 |
| 365 | 59.20 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 389 | 59.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 420 | 59.32 | humidity | 60.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 430 | 59.34 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 7 |
| 434 | 59.34 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 452 | 59.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 459 | 59.36 | humidity | 60.0 | 720 | < th | dose independent | rect. | 12 | 21 |
| 466 | 59.37 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 486 | 59.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 500 | 59.43 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 508 | 59.44 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 22 |
| 515 | 59.45 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 533 | 59.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 590 | 59.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 630 | 59.59 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 646 | 59.60 | temperature | 30.0 | 720 | > th | dose independent | sin | 17 | NA |
| 718 | 59.66 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 724 | 59.67 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 20 |
| 814 | 59.77 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 857 | 59.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 898 | 59.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 903 | 59.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 913 | 59.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 919 | 59.87 | humidity | 60.0 | 720 | < th | dose independent | sin | 19 | NA |
| 923 | 59.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 931 | 59.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 933 | 59.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 965 | 59.89 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 6 | 15 |
| 969 | 59.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |