Os12g0637400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Purple acid phosphatase (EC 3.1.3.2) (Fragment).
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Os12g0637400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Purple acid phosphatase (EC 3.1.3.2) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 713.49 | 1.25 | 3.4 | 0.0789 | 0.784 | -8.23 | 0.0126 | -11 | 1.4 | 11.4 | 8.8 | 589 | -- | -- |
| 720.36 | 1.25 | 3.38 | 0.0251 | 0.723 | -6.59 | 0.39 | -- | 1.28 | 11.3 | 8.8 | 534 | -- | -- |
| 712.09 | 1.24 | 3.42 | 0.075 | 0.765 | -8.64 | -- | -12.6 | 1.38 | 11.3 | 8.709 | 570 | -- | -- |
| 715.4 | 1.25 | 3.35 | -0.0474 | 0.771 | -5.87 | -- | -- | 1.41 | 11.3 | 8.774 | 576 | -- | -- |
| 749.13 | 1.27 | 3.43 | 0.05 | -- | -8.44 | -- | -12.7 | 1.38 | -- | 8.711 | 561 | -- | -- |
| 850.59 | 1.37 | 3.4 | -0.541 | 0.649 | -- | 0.313 | -- | 1.22 | 12.3 | -- | -- | -- | -- |
| 850.99 | 1.37 | 3.4 | -0.528 | 0.649 | -- | -- | -- | 1.22 | 12.4 | -- | -- | -- | -- |
| 751.74 | 1.28 | 3.37 | -0.0916 | -- | -5.62 | -- | -- | 1.39 | -- | 8.73 | 560 | -- | -- |
| 715.46 | 1.25 | 3.35 | -- | 0.769 | -5.9 | -- | -- | 1.42 | 11.3 | 8.783 | 576 | -- | -- |
| 877.42 | 1.38 | 3.42 | -0.55 | -- | -- | -- | -- | 1.21 | -- | -- | -- | -- | -- |
| 858.35 | 1.37 | 3.39 | -- | 0.656 | -- | -- | -- | 1.28 | 12.4 | -- | -- | -- | -- |
| 751.95 | 1.28 | 3.37 | -- | -- | -5.66 | -- | -- | 1.41 | -- | 8.764 | 560 | -- | -- |
| 885.41 | 1.39 | 3.4 | -- | -- | -- | -- | -- | 1.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 704.00 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 3 | 707.01 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 10 | 710.14 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 1 |
| 19 | 716.25 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 29 | 717.55 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 32 | 717.58 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 42 | 718.37 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 47 | 719.68 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 51 | 720.02 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 54 | 720.53 | wind | 7 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 56 | 720.60 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 69 | 720.91 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 21 |
| 82 | 721.72 | wind | 9 | 270 | < th | dose independent | sin | 14 | NA |
| 92 | 721.94 | wind | 9 | 270 | > th | dose independent | sin | 13 | NA |
| 93 | 721.94 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 22 |
| 104 | 722.66 | wind | 9 | 270 | > th | dose dependent | sin | 11 | NA |
| 109 | 722.82 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 120 | 722.94 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 14 |
| 134 | 723.50 | wind | 7 | 270 | > th | dose dependent | sin | 15 | NA |
| 143 | 723.64 | wind | 9 | 720 | > th | dose dependent | sin | 0 | NA |
| 145 | 723.82 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 11 |
| 154 | 724.32 | wind | 9 | 720 | < th | dose independent | sin | 23 | NA |
| 197 | 725.83 | wind | 9 | 720 | > th | dose independent | sin | 23 | NA |
| 246 | 726.80 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 276 | 727.08 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 418 | 728.41 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 432 | 728.57 | wind | 9 | 720 | < th | dose independent | rect. | 11 | 16 |
| 461 | 728.79 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 531 | 729.26 | wind | 9 | 720 | < th | dose independent | rect. | 13 | 23 |
| 593 | 730.84 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 23 |
| 608 | 731.39 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 13 |
| 676 | 735.17 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 692 | 736.79 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 9 |
| 745 | 738.18 | wind | 9 | 720 | < th | dose independent | rect. | 9 | 16 |
| 756 | 738.61 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 757 | 738.63 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 17 |
| 772 | 739.17 | wind | 9 | 720 | < th | dose independent | rect. | 4 | 23 |
| 782 | 739.56 | radiation | 1 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 799 | 740.51 | wind | 7 | 720 | < th | dose independent | rect. | 7 | 20 |
| 802 | 740.57 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 805 | 740.73 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 818 | 740.90 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 9 |
| 826 | 740.94 | wind | 9 | 10 | < th | dose independent | sin | 13 | NA |
| 829 | 741.03 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 845 | 741.20 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 880 | 741.94 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 6 |
| 900 | 742.09 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 952 | 742.51 | wind | 9 | 30 | > th | dose independent | sin | 14 | NA |