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Os12g0635700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.62 (0.0285) R2 : 0.593
β1 : 1.95 (0.104) R2dD : 0.323 R2D : 0.363
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.845 (0.0609) R2dN8 : 0.23 R2N8 : 0.269
σ : 0.536
deviance : 131.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.75 0.469 8.59 2.43 0.00496 1.12 -1.42 2.98 -0.898 14.2 1 4339 -- --
110.69 0.49 8.65 2.18 0.0725 0.813 -1.85 -- -0.902 13.3 3.571 4362 -- --
106.48 0.481 8.59 2.44 0.00839 1.08 -- 3.05 -0.89 13.4 1.01 4299 -- --
107.39 0.483 8.67 1.83 0.0486 1.14 -- -- -1.1 12.9 2.001 2899 -- --
106.56 0.481 8.59 2.41 -- 1.08 -- 2.99 -0.89 -- 1 4299 -- --
124.21 0.522 8.61 1.99 0.00358 -- 1.41 -- -0.836 2.5 -- -- -- --
130.28 0.535 8.61 1.95 0.14 -- -- -- -0.846 7.96 -- -- -- --
107.4 0.483 8.67 1.81 -- 1.19 -- -- -1.11 -- 2.011 2907 -- --
121.18 0.513 8.67 -- 0.0572 1.6 -- -- -1.17 12.7 1.539e-06 47520 -- --
131.34 0.536 8.62 1.95 -- -- -- -- -0.845 -- -- -- -- --
230.52 0.71 8.66 -- 0.157 -- -- -- -1.06 7.06 -- -- -- --
113.98 0.497 8.79 -- -- 1.72 -- -- -1.64 -- 0.67 47520 -- --
231.82 0.711 8.67 -- -- -- -- -- -1.06 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.99 radiation 40.0 1440 < th dose independent rect. 17 16
2 94.33 radiation 40.0 1440 > th dose independent rect. 8 1
20 94.99 radiation 40.0 1440 < th dose independent rect. 19 14
22 95.05 radiation 40.0 1440 < th dose independent rect. 8 1
24 95.50 radiation 40.0 1440 < th dose independent rect. 22 11
28 95.79 radiation 1.0 43200 < th dose dependent rect. 19 10
29 95.80 radiation 40.0 1440 < th dose independent rect. 24 9
30 95.81 radiation 1.0 14400 < th dose independent rect. 18 11
31 95.81 radiation 1.0 43200 < th dose dependent rect. 23 6
39 96.22 radiation 1.0 43200 < th dose dependent rect. 4 1
41 96.23 radiation 1.0 14400 < th dose independent rect. 18 7
46 96.27 radiation 1.0 14400 < th dose independent rect. 18 3
51 96.28 radiation 1.0 14400 > th dose independent rect. 18 11
53 96.46 radiation 1.0 14400 > th dose independent rect. 18 1
113 97.59 atmosphere 1005.0 43200 > th dose independent rect. 15 1
114 97.71 radiation 1.0 4320 < th dose independent rect. 18 13
115 97.74 temperature 25.0 14400 > th dose independent rect. 23 1
117 97.75 radiation 1.0 4320 > th dose independent rect. 18 13
136 98.00 atmosphere 1005.0 43200 > th dose dependent rect. 4 1
137 98.04 radiation 1.0 43200 < th dose dependent rect. 6 23
140 98.07 atmosphere 1005.0 43200 > th dose independent rect. 15 4
146 98.11 radiation 10.0 4320 < th dose dependent rect. 5 1
147 98.13 radiation 1.0 4320 < th dose dependent rect. 18 13
149 98.18 radiation 1.0 43200 < th dose dependent rect. 6 14
151 98.18 radiation 1.0 43200 < th dose dependent rect. 6 17
152 98.19 temperature 25.0 14400 < th dose independent rect. 23 1
164 98.26 atmosphere 1005.0 43200 > th dose independent rect. 18 1
170 98.31 temperature 20.0 43200 < th dose independent rect. 5 1
217 98.50 temperature 20.0 43200 > th dose independent rect. 6 1
221 98.50 radiation 1.0 43200 < th dose dependent rect. 6 1
231 98.52 radiation 1.0 43200 < th dose dependent rect. 18 22
234 98.53 radiation 10.0 4320 < th dose dependent rect. 22 8
239 98.55 radiation 10.0 4320 < th dose dependent rect. 24 6
241 98.56 radiation 10.0 4320 < th dose dependent rect. 2 4
242 98.57 temperature 25.0 4320 > th dose dependent rect. 8 1
261 98.59 radiation 1.0 43200 < th dose dependent rect. 12 17
265 98.60 atmosphere 1005.0 43200 < th dose independent rect. 16 1
277 98.63 radiation 1.0 43200 < th dose dependent sin 21 NA
278 98.64 temperature 25.0 4320 > th dose independent rect. 8 1
285 98.65 radiation 40.0 43200 < th dose dependent rect. 18 7
302 98.68 temperature 25.0 43200 < th dose independent rect. 17 1
309 98.69 radiation 1.0 14400 < th dose dependent rect. 18 2
324 98.72 radiation 1.0 43200 < th dose dependent rect. 12 8
360 98.75 precipitation 0.1 43200 > th dose independent rect. 9 1
361 98.75 precipitation 0.1 43200 > th dose dependent rect. 9 1
367 98.76 temperature 25.0 43200 > th dose independent rect. 17 1
385 98.79 atmosphere 1010.0 43200 < th dose independent rect. 7 1
388 98.79 atmosphere 1005.0 43200 > th dose dependent rect. 23 1
428 98.85 radiation 40.0 43200 < th dose dependent rect. 18 3
452 98.88 atmosphere 1005.0 43200 > th dose dependent sin 10 NA
462 98.89 temperature 20.0 43200 > th dose independent rect. 1 1
473 98.90 precipitation 0.1 43200 < th dose independent rect. 9 1
475 98.90 temperature 20.0 43200 < th dose independent rect. 1 7
479 98.90 precipitation 0.1 43200 < th dose dependent rect. 9 1
488 98.91 temperature 20.0 43200 < th dose independent rect. 1 1
507 98.93 temperature 20.0 43200 < th dose independent rect. 23 9
510 98.93 radiation 20.0 4320 > th dose dependent rect. 6 2
529 98.94 temperature 20.0 43200 > th dose independent rect. 1 7
553 98.97 radiation 1.0 4320 > th dose independent sin 11 NA
555 98.97 temperature 20.0 43200 > th dose independent rect. 23 9
598 99.00 radiation 1.0 4320 < th dose dependent rect. 18 18
600 99.01 temperature 25.0 4320 < th dose independent rect. 8 1
601 99.01 radiation 20.0 4320 > th dose independent rect. 6 2
626 99.02 temperature 20.0 43200 < th dose independent rect. 5 10
641 99.02 radiation 1.0 43200 < th dose dependent rect. 4 15
665 99.03 radiation 1.0 4320 > th dose independent rect. 12 19
693 99.03 radiation 1.0 43200 < th dose dependent rect. 12 23
710 99.04 radiation 1.0 43200 < th dose dependent no NA NA
767 99.07 radiation 1.0 43200 < th dose dependent rect. 10 23
795 99.09 temperature 20.0 43200 > th dose independent rect. 5 10
836 99.12 temperature 20.0 43200 < th dose independent sin 7 NA
843 99.12 radiation 1.0 4320 > th dose independent rect. 18 22
877 99.14 radiation 1.0 4320 < th dose independent sin 11 NA
888 99.14 radiation 1.0 4320 > th dose independent rect. 16 15
927 99.16 radiation 1.0 4320 < th dose independent rect. 18 22
942 99.17 temperature 20.0 43200 > th dose independent sin 7 NA