Os12g0623900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene-responsive methionine synthase (Fragment).
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Os12g0623900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene-responsive methionine synthase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.65 | 0.384 | 13.5 | 1.51 | 1.31 | 1.43 | -0.0694 | 3.52 | 0.395 | 9.05 | 5.315 | 566 | -- | -- |
| 68.33 | 0.385 | 13.5 | 1.48 | 1.35 | 0.715 | -0.279 | -- | 0.416 | 9 | 4.081 | 662 | -- | -- |
| 66.65 | 0.38 | 13.5 | 1.5 | 1.31 | 1.47 | -- | 3.7 | 0.395 | 9.05 | 5.4 | 566 | -- | -- |
| 68.49 | 0.385 | 13.5 | 1.44 | 1.31 | 0.65 | -- | -- | 0.408 | 9.07 | 4.113 | 662 | -- | -- |
| 152.48 | 0.578 | 13.5 | 1.32 | -- | 0.3 | -- | 1.16 | 0.394 | -- | 6.128 | 1545 | -- | -- |
| 71.8 | 0.397 | 13.5 | 1.32 | 1.19 | -- | -0.112 | -- | 0.392 | 9.11 | -- | -- | -- | -- |
| 71.84 | 0.397 | 13.5 | 1.32 | 1.19 | -- | -- | -- | 0.392 | 9.1 | -- | -- | -- | -- |
| 147.97 | 0.567 | 13.6 | 1.43 | -- | 0.512 | -- | -- | 0.327 | -- | 7.836 | 4364 | -- | -- |
| 98.65 | 0.463 | 13.5 | -- | 1.15 | -1.25 | -- | -- | 0.173 | 9.03 | 1.317 | 23153 | -- | -- |
| 153.17 | 0.578 | 13.5 | 1.31 | -- | -- | -- | -- | 0.398 | -- | -- | -- | -- | -- |
| 117.45 | 0.507 | 13.5 | -- | 1.19 | -- | -- | -- | 0.245 | 9.02 | -- | -- | -- | -- |
| 171.03 | 0.609 | 13.6 | -- | -- | -0.838 | -- | -- | 0.0766 | -- | 6.6 | 47520 | -- | -- |
| 198.63 | 0.658 | 13.5 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 14 |
| 2 | 64.42 | wind | 5.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 3 | 64.44 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 17 |
| 4 | 64.45 | wind | 5.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 18 | 64.79 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 21 | 64.86 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 15 |
| 23 | 64.93 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 27 | 64.96 | radiation | 10.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 33 | 65.04 | wind | 7.0 | 720 | < th | dose independent | rect. | 7 | 17 |
| 39 | 65.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 50 | 65.21 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 54 | 65.24 | wind | 7.0 | 720 | < th | dose independent | sin | 8 | NA |
| 56 | 65.24 | radiation | 10.0 | 270 | > th | dose independent | rect. | 9 | 5 |
| 58 | 65.26 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 64 | 65.29 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 20 | 12 |
| 75 | 65.36 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 11 |
| 76 | 65.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 82 | 65.44 | wind | 7.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 90 | 65.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 91 | 65.48 | humidity | 80.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 93 | 65.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 5 |
| 94 | 65.49 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 95 | 65.50 | wind | 5.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 98 | 65.51 | wind | 7.0 | 720 | > th | dose independent | sin | 10 | NA |
| 104 | 65.54 | wind | 5.0 | 30 | < th | dose independent | rect. | 16 | 4 |
| 107 | 65.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 119 | 65.58 | humidity | 80.0 | 10 | < th | dose independent | rect. | 10 | 8 |
| 139 | 65.69 | wind | 5.0 | 30 | < th | dose independent | rect. | 14 | 6 |
| 143 | 65.72 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 7 |
| 146 | 65.74 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 149 | 65.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 162 | 65.81 | humidity | 80.0 | 270 | < th | dose independent | sin | 3 | NA |
| 188 | 65.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 211 | 65.95 | wind | 7.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 215 | 65.97 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 232 | 66.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 240 | 66.02 | wind | 7.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 241 | 66.02 | wind | 5.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 257 | 66.06 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 259 | 66.07 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 269 | 66.07 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 277 | 66.09 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 10 | 8 |
| 286 | 66.11 | humidity | 50.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 289 | 66.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 297 | 66.12 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 334 | 66.19 | wind | 5.0 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 340 | 66.21 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 4 |
| 352 | 66.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 14 |
| 357 | 66.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 364 | 66.25 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 368 | 66.25 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 20 |
| 383 | 66.27 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 384 | 66.27 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 387 | 66.27 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 392 | 66.27 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 394 | 66.27 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 397 | 66.27 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 10 | 6 |
| 406 | 66.29 | wind | 7.0 | 90 | < th | dose independent | rect. | 10 | 6 |
| 408 | 66.29 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 409 | 66.29 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 13 |
| 416 | 66.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 436 | 66.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 456 | 66.37 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 467 | 66.38 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 471 | 66.38 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 478 | 66.39 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 502 | 66.42 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 506 | 66.42 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 514 | 66.42 | wind | 9.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 527 | 66.45 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 530 | 66.45 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 534 | 66.45 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 539 | 66.45 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 540 | 66.45 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 564 | 66.47 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 575 | 66.48 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 10 |
| 578 | 66.48 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 581 | 66.48 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 10 |
| 594 | 66.50 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 596 | 66.50 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 11 |
| 607 | 66.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 11 |
| 618 | 66.52 | wind | 7.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 633 | 66.53 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 639 | 66.54 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 640 | 66.54 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 13 |
| 644 | 66.55 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 645 | 66.55 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 646 | 66.55 | wind | 7.0 | 720 | < th | dose independent | rect. | 21 | 7 |
| 666 | 66.56 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 676 | 66.57 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 9 |
| 678 | 66.57 | wind | 5.0 | 720 | < th | dose independent | rect. | 3 | 15 |
| 693 | 66.58 | wind | 5.0 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 700 | 66.59 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 714 | 66.60 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 16 |
| 719 | 66.60 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 728 | 66.61 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 738 | 66.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 19 |
| 742 | 66.62 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 6 |
| 746 | 66.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 757 | 66.63 | temperature | 15.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 780 | 66.64 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 18 |
| 782 | 66.64 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 19 |
| 808 | 66.66 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 820 | 66.66 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 18 |
| 827 | 66.67 | wind | 9.0 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 862 | 66.69 | humidity | 50.0 | 720 | > th | dose independent | rect. | 15 | 15 |
| 872 | 66.69 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 7 |
| 885 | 66.70 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 917 | 66.72 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 938 | 66.72 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 955 | 66.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 977 | 66.75 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 986 | 66.76 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 991 | 66.76 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 10 |