BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0623900 Os12g0623900|AK065255
         (766 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0623900  Similar to Ethylene-responsive methionine synt...  1519   0.0  
Os12g0624000  Similar to Methionine synthase protein             1507   0.0  
AK111164                                                          717   0.0  
AK108840                                                          530   e-150
>Os12g0623900 Similar to Ethylene-responsive methionine synthase (Fragment)
          Length = 766

 Score = 1519 bits (3934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/766 (96%), Positives = 739/766 (96%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
           MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60

Query: 61  TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120
           TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI
Sbjct: 61  TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120

Query: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXX 180
           VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFA    
Sbjct: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFALLSL 180

Query: 181 XXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240
                PVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI
Sbjct: 181 LSSILPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240

Query: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300
           ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW
Sbjct: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300

Query: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360
           ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV
Sbjct: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360

Query: 361 EVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATNVSAR 420
           EVNALAKALAGQKDE                  VTNEEVQKAAAALKGSDHRRATNVSAR
Sbjct: 361 EVNALAKALAGQKDEAYFAANAAAQASRRSSPRVTNEEVQKAAAALKGSDHRRATNVSAR 420

Query: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480
           LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE
Sbjct: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480

Query: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540
           ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT
Sbjct: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540

Query: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600
           VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI
Sbjct: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600

Query: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660
           QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS
Sbjct: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660

Query: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720
           IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML
Sbjct: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720

Query: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766
           AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK
Sbjct: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766
>Os12g0624000 Similar to Methionine synthase protein
          Length = 766

 Score = 1507 bits (3901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/766 (95%), Positives = 735/766 (95%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
           MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60

Query: 61  TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120
           TFSYYDQVLDT AMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI
Sbjct: 61  TFSYYDQVLDTTAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120

Query: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXX 180
           VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFA    
Sbjct: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFALLSL 180

Query: 181 XXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240
                PVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI
Sbjct: 181 LSSILPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240

Query: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300
           ETYFADIPAESYKTLTSLNSVTAYGFDLIRG+KTLDL+KSAGFPSGKYLFAGVVDGRNIW
Sbjct: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGSKTLDLVKSAGFPSGKYLFAGVVDGRNIW 300

Query: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360
           ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV
Sbjct: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360

Query: 361 EVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATNVSAR 420
           EVNALAKALAGQKDE                  VTNEEVQKAAAAL+GSDHRRATNVSAR
Sbjct: 361 EVNALAKALAGQKDEAYFAANTAAQASRRSSPRVTNEEVQKAAAALRGSDHRRATNVSAR 420

Query: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480
           LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISE+EY+SAIKEEISKVVKIQE
Sbjct: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEDEYVSAIKEEISKVVKIQE 480

Query: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540
           ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPN MT
Sbjct: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNAMT 540

Query: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600
           VFWSK+AQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI
Sbjct: 541 VFWSKMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600

Query: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660
           QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS
Sbjct: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660

Query: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720
           IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADR+NKML
Sbjct: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKML 720

Query: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766
           AVLDTNILWVNPDCGLKTRKY EVKPALTNMV AAKLIRTQLASAK
Sbjct: 721 AVLDTNILWVNPDCGLKTRKYTEVKPALTNMVLAAKLIRTQLASAK 766
>AK111164 
          Length = 766

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/773 (48%), Positives = 498/773 (64%), Gaps = 17/773 (2%)

Query: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
           + S ++G+PRMG  R+ K A +++W  K S ++L K A  LR + W+   DAG+  IPSN
Sbjct: 2   VQSSVLGFPRMGANRDPKKANDAYWADKLSRDELVKEAKRLRLAHWQIQKDAGVDVIPSN 61

Query: 61  TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGN----ATVPAMEMTKWFDTN 116
            F++YD +LD   +  A+PERYS    +     YF+M RG+      VPA+EM KWFD+N
Sbjct: 62  DFAFYDHLLDHIQLFNAIPERYSKNKLD-PLDEYFAMCRGHQKDGVDVPALEMVKWFDSN 120

Query: 117 YHFIVPELGPNTKFSYSSH-KAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSF 175
           YH++ P L  N  F+ +S  K V E+ EAK  G+ T PVLVGPVS+L L K  +G  +S 
Sbjct: 121 YHYVKPTLQDNQTFTLASDPKPVREFLEAKEAGIATRPVLVGPVSFLHLGKADRG--QSV 178

Query: 176 AXXXXXXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSG 235
                     PVY E++ +LK AGA  +Q DEP LV DL      AF  AY  L +  SG
Sbjct: 179 DPISLLDKLVPVYVELLKKLKEAGAETVQIDEPVLVQDLPQKVKDAFKPAYQALTA--SG 236

Query: 236 L-NVLIETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVV 294
           L  +++ TYF D+   ++    SL SV     DL+R  + L+ +      S + L AGVV
Sbjct: 237 LPKIVLATYFGDV-VHNFDVFPSLQSVYGIHVDLVRNPEQLEAV-IGKLGSSQILSAGVV 294

Query: 295 DGRNIWADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAF 354
           DGRNIW  +   ++ T+E+    +GKD+++V+TS SL+HT   L  E KLD+E+  W +F
Sbjct: 295 DGRNIWKTNFKRAIETVETAIQKLGKDRVIVATSSSLLHTPHSLEAEKKLDAEVADWFSF 354

Query: 355 AAQKVVEVNALAKALAGQKD--EXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHR 412
           A QKV EV  +AKA+                          + N+ V+   AA+K +DH 
Sbjct: 355 AVQKVPEVTIIAKAVTEGPAAVREALEANAKSMESRATSKRINNKAVKDRQAAVKPADHE 414

Query: 413 RATNVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEI 472
           R +    RL AQ+  L LP+ PTTTIGSFPQT E+R  R ++   +I+ +EY   I++EI
Sbjct: 415 RQSPFPQRLAAQKTHLKLPIFPTTTIGSFPQTKEIRIQRNKFTKGEITAQEYERFIEKEI 474

Query: 473 SKVVKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGD 532
            +VV+IQEELD+DVLVHGEPERNDMV+YFGE+L G+AFT NGWVQSYGSRCV+PPII GD
Sbjct: 475 EEVVRIQEELDLDVLVHGEPERNDMVQYFGERLDGYAFTTNGWVQSYGSRCVRPPIIVGD 534

Query: 533 VSRPNPMTVFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEV 592
           +SRP  MTV  SK A S++ +PMKGMLTGP+T L WSF R+D  +     Q+ALAI+ EV
Sbjct: 535 ISRPAAMTVKESKYAASISKKPMKGMLTGPITCLRWSFPRDDVHQSVQAQQLALAIRDEV 594

Query: 593 EDLEAGGIQVIQIDEAALREGLPLRKA-EHAFYLDWAVHSFRITNCGVQDTTQIHTHMCY 651
            DLE+ G+ VIQIDE ALREGLPLR   E   YL WAV SF+++  G++D+TQIH+H CY
Sbjct: 595 VDLESAGVFVIQIDEPALREGLPLRAGEEREKYLSWAVDSFKLSAAGIKDSTQIHSHFCY 654

Query: 652 SNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEE 711
           S F D  H+I  +DADV++IENS+SD KLL VF E  +Y   IGPGVYDIHSPR+P+ +E
Sbjct: 655 SEFQDFFHAIAALDADVLSIENSKSDAKLLKVF-EDKEYPRHIGPGVYDIHSPRVPAEQE 713

Query: 712 IADRVNKMLAVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLAS 764
           + DR+ +ML  L    LW+NPDCGLKTR++ E K ALTNMV+AAK  R + A+
Sbjct: 714 MKDRIGEMLQWLKPEQLWINPDCGLKTRQWKETKAALTNMVNAAKSFREKHAA 766
>AK108840 
          Length = 786

 Score =  530 bits (1366), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/777 (40%), Positives = 444/777 (57%), Gaps = 53/777 (6%)

Query: 7   GYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSNTFSYYD 66
           G+PR+G +RE+K ALE +W    S  DL +V   + A+ W+  A A I  I  +  + YD
Sbjct: 10  GFPRIGARREMKTALEKYWANSMSQNDLMQVYQQVTAADWELQAKANIARIGIDG-TLYD 68

Query: 67  QVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFIVPEL-G 125
           Q+LD    LG  P R++   G      YF+MARG + V A++M+K+FDTNYH++VPEL G
Sbjct: 69  QMLDMTFTLGLTPVRFANFNG---LEAYFAMARGASGVGALDMSKFFDTNYHYLVPELEG 125

Query: 126 PNTKFSYSSHKAVNEYKEAKAL--GVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXXXXX 183
             +  S +  + +++   A+AL      +P+L+GPV+Y+LLSK      +  A       
Sbjct: 126 GFSCKSPNFAQLLDKVARAQALLGKKRAIPMLIGPVTYVLLSK------RDLALEHAVER 179

Query: 184 XXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLIETY 243
             P Y +++ +L+  G   +Q  EP L  D  +   + +  AY +L  A  G  + + TY
Sbjct: 180 LLPCYAQLLRKLQLLGCPEVQLHEPCLATDAGAAARSVYEFAYAQL--AAVGCPIDLVTY 237

Query: 244 FADIPAESYKTLTSLNSVTAYGFDLI------RGAKTLDLIKSAGFPSGKYLFAGVVDGR 297
           + D+ A +Y     L  V A   D         G  TL+LI+  GFPS K L AG++D R
Sbjct: 238 YDDLGA-AYPWAVKL-PVAAVSLDFCGVPGSAAGNATLELIRQHGFPSDKRLGAGLIDAR 295

Query: 298 NIWADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTA-VDLVNETKLDSEIKSWLAFAA 356
           ++WADDL A+   L  L   +G   + V  S +L H        E  L +++   LAFA 
Sbjct: 296 SVWADDLPAAAAVLHELTTSLGITNVSVQPSTTLQHLPYTTAAEEGHLPADLLPKLAFAV 355

Query: 357 QKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATN 416
           QK+  + ALA                              +    AAAA  G+       
Sbjct: 356 QKLEALAALASG--------------AVTPASPAAAQAWGQPPDGAAAAKSGTLPGVDDA 401

Query: 417 VSARLDAQQ----KKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEI 472
           + AR ++ +    K+      PT+TIGSFPQT E+RR+R   +  K+S  EY   + ++I
Sbjct: 402 LLARSESYEVRRPKQPQFHAYPTSTIGSFPQTAEVRRLRTLLRTGKLSRTEYERQVDQQI 461

Query: 473 SKVVKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGD 532
           +  V +QE + +DVLVHGEPER DMVEYFG QL G AFT  GWVQSYGSR V+PPII GD
Sbjct: 462 AFAVGVQEAVGLDVLVHGEPERTDMVEYFGVQLGGLAFTLQGWVQSYGSRYVRPPIITGD 521

Query: 533 VSRPNPMTVFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEV 592
           V+   PMTV    +AQ +T++P+KGMLTGPVTILNWSF R D  R     Q+ LA+++EV
Sbjct: 522 VAFLQPMTVREFIVAQQLTAKPVKGMLTGPVTILNWSFPRKDISRAAQAAQLGLALRQEV 581

Query: 593 EDLEAGGIQVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYS 652
           E L+  G ++IQ+DE ALREGLPL+    A YL WAV +FR++    + + QI TH+CYS
Sbjct: 582 EALQTAGCKIIQVDEPALREGLPLKVERWAGYLGWAVDAFRLSTSIAKPSVQIVTHLCYS 641

Query: 653 NFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEI 712
           +F DI+  +  MDADV+TIENSRS + ++S       YG  +GPGVYD+HSP++P  + +
Sbjct: 642 DFEDIMEPVDAMDADVLTIENSRSSDAMVSAL-AAANYGRDLGPGVYDVHSPQVPDVDWL 700

Query: 713 ADRVNKMLAVLDTNIL-------WVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQL 762
              V K+   +D+ +L       WVNPDCGLKTR+++EV P+L NMV AA ++R +L
Sbjct: 701 ---VEKLQGFVDSGVLKGRPEHIWVNPDCGLKTRRWSEVIPSLRNMVQAAAIMRDRL 754
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,979,107
Number of extensions: 973181
Number of successful extensions: 2276
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2255
Number of HSP's successfully gapped: 4
Length of query: 766
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 657
Effective length of database: 11,344,475
Effective search space: 7453320075
Effective search space used: 7453320075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)