BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0623900 Os12g0623900|AK065255
(766 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17920.1 | chr5:5935771-5939195 FORWARD LENGTH=766 1367 0.0
AT3G03780.1 | chr3:957602-960740 FORWARD LENGTH=766 1359 0.0
AT5G20980.1 | chr5:7124397-7128353 REVERSE LENGTH=813 1253 0.0
>AT5G17920.1 | chr5:5935771-5939195 FORWARD LENGTH=766
Length = 765
Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/766 (84%), Positives = 693/766 (90%), Gaps = 1/766 (0%)
Query: 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
MASHIVGYPRMGPKRELKFALESFWDGKS+AEDL+KV+ DLR+SIWKQM+ AG K+IPSN
Sbjct: 1 MASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSN 60
Query: 61 TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120
TF++YDQVLDT AMLGAVP RY +TGGEIG YFSMARGNA+VPAMEMTKWFDTNYH+I
Sbjct: 61 TFAHYDQVLDTTAMLGAVPPRYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYI 120
Query: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXX 180
VPELGP FSY+SHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSK AKGV+KSF
Sbjct: 121 VPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSL 180
Query: 181 XXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240
P+YKEVI ELKAAGATWIQ DEP LV+DL+ +L AF+ AY ELES LSGLNVL+
Sbjct: 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLV 240
Query: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300
ETYFADIPAE+YKTLTSL VTA+GFDL+RG KTLDL+K AGFP GKYLFAGVVDGRNIW
Sbjct: 241 ETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVK-AGFPEGKYLFAGVVDGRNIW 299
Query: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360
A+D AASL+TL++LE IVGKDKLVVSTSCSL+HTAVDL+NETKLD EIKSWLAFAAQKVV
Sbjct: 300 ANDFAASLSTLQALEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWLAFAAQKVV 359
Query: 361 EVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATNVSAR 420
EVNALAKALAGQKDE VTNE VQKAAAALKGSDHRRATNVSAR
Sbjct: 360 EVNALAKALAGQKDEALFSANAAALASRRSSPRVTNEGVQKAAAALKGSDHRRATNVSAR 419
Query: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480
LDAQQKKLNLP+LPTTTIGSFPQTVELRRVRREYKAKK+SEE+Y+ AIKEEI KVV +QE
Sbjct: 420 LDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQE 479
Query: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540
ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSRP MT
Sbjct: 480 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMT 539
Query: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600
VFWS +AQSMTSRPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIK EVEDLE GGI
Sbjct: 540 VFWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGI 599
Query: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660
VIQIDEAALREGLPLRK+EHAFYLDWAVHSFRITNCGVQD+TQIHTHMCYS+FNDIIHS
Sbjct: 600 GVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHS 659
Query: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720
II+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPS+EEIADRVNKML
Sbjct: 660 IIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKML 719
Query: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766
AVL+ NILWVNPDCGLKTRKY EVKPAL NMV AAKLIR+QLASAK
Sbjct: 720 AVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQLASAK 765
>AT3G03780.1 | chr3:957602-960740 FORWARD LENGTH=766
Length = 765
Score = 1359 bits (3517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/766 (84%), Positives = 689/766 (89%), Gaps = 1/766 (0%)
Query: 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
MASHIVGYPRMGPKRELKFALESFWDGKSSA+DL+KV+ DLR+ IWKQM+ AGIKYIPSN
Sbjct: 1 MASHIVGYPRMGPKRELKFALESFWDGKSSADDLQKVSADLRSDIWKQMSAAGIKYIPSN 60
Query: 61 TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120
TFS+YDQVLDT AMLGAVP RY +T GEIG YFSMARGNA+VPAMEMTKWFDTNYH+I
Sbjct: 61 TFSHYDQVLDTTAMLGAVPSRYGFTSGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYI 120
Query: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXX 180
VPELGP KFSY+SHKAVNEYKEAKALGV+TVPVLVGPVSYLLLSK AKGV+KSF
Sbjct: 121 VPELGPEVKFSYASHKAVNEYKEAKALGVETVPVLVGPVSYLLLSKLAKGVDKSFDLLSL 180
Query: 181 XXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240
PVYKEVIAELKAAGA+WIQ DEP V+DL+ H+L AFS AY ELES LSGLNVL+
Sbjct: 181 LPKILPVYKEVIAELKAAGASWIQLDEPLFVMDLEGHKLQAFSGAYAELESTLSGLNVLV 240
Query: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300
ETYFADIPAE+YKTLTSL VTA+GFDL+RG KT+DLIKS GFP GKYLFAGVVDGRNIW
Sbjct: 241 ETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTIDLIKS-GFPQGKYLFAGVVDGRNIW 299
Query: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360
A+DLAASL TL+SLE +VGKDKLVVSTSCSL+HTAVDL+NETKLD+EIKSWLAFAAQKVV
Sbjct: 300 ANDLAASLITLQSLEGVVGKDKLVVSTSCSLLHTAVDLINETKLDAEIKSWLAFAAQKVV 359
Query: 361 EVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATNVSAR 420
EV+ALAKALAGQ +E VTNE VQKAAAALKGSDHRR T VSAR
Sbjct: 360 EVDALAKALAGQTNESFFTANADALSSRRSSPRVTNESVQKAAAALKGSDHRRTTEVSAR 419
Query: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480
LDAQQKKLNLP+LPTTTIGSFPQTVELRRVRREYKAKKISEE+Y+ AIKEEI KVV IQE
Sbjct: 420 LDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEDYVKAIKEEIKKVVDIQE 479
Query: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540
+LDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSRP PMT
Sbjct: 480 DLDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKPMT 539
Query: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600
VFWS AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIK EVEDLE GGI
Sbjct: 540 VFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGI 599
Query: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660
VIQIDEAALREGLPLRKAEH+FYLDWAVHSFRITNCGVQD+TQIHTHMCYSNFNDIIHS
Sbjct: 600 GVIQIDEAALREGLPLRKAEHSFYLDWAVHSFRITNCGVQDSTQIHTHMCYSNFNDIIHS 659
Query: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720
II+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPST+EIADR+NKML
Sbjct: 660 IIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIADRINKML 719
Query: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQLASAK 766
AVL+ NILWVNPDCGLKTRKY EVKPAL MV AAKLIR+QL SAK
Sbjct: 720 AVLEQNILWVNPDCGLKTRKYTEVKPALKAMVDAAKLIRSQLGSAK 765
>AT5G20980.1 | chr5:7124397-7128353 REVERSE LENGTH=813
Length = 812
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/762 (77%), Positives = 657/762 (86%), Gaps = 1/762 (0%)
Query: 1 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLEKVATDLRASIWKQMADAGIKYIPSN 60
M+SHIVGYPR+GPKRELKFALESFWDGK++ +DL+ VA +LR SIWK MA AGIKYIPSN
Sbjct: 49 MSSHIVGYPRIGPKRELKFALESFWDGKTNVDDLQNVAANLRKSIWKHMAHAGIKYIPSN 108
Query: 61 TFSYYDQVLDTAAMLGAVPERYSWTGGEIGFSTYFSMARGNATVPAMEMTKWFDTNYHFI 120
TFSYYDQ+LDT AMLGAVP RY W GEIGF YFSMARGNA+ AMEMTKWFDTNYH+I
Sbjct: 109 TFSYYDQMLDTTAMLGAVPSRYGWESGEIGFDVYFSMARGNASAHAMEMTKWFDTNYHYI 168
Query: 121 VPELGPNTKFSYSSHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKSFAXXXX 180
VPELGP+ FSY+SHKAV E+KEAKALG+DTVPVL+GP++YLLLSKPAKGVEKSF
Sbjct: 169 VPELGPDVNFSYASHKAVVEFKEAKALGIDTVPVLIGPMTYLLLSKPAKGVEKSFCLLSL 228
Query: 181 XXXXXPVYKEVIAELKAAGATWIQFDEPTLVLDLDSHQLAAFSAAYTELESALSGLNVLI 240
PVYKEV+A+LK+AGA WIQFDEP LV+DLD+ QL AFS AY+ +ES+L+GLNVLI
Sbjct: 229 IDKILPVYKEVLADLKSAGARWIQFDEPILVMDLDTSQLQAFSDAYSHMESSLAGLNVLI 288
Query: 241 ETYFADIPAESYKTLTSLNSVTAYGFDLIRGAKTLDLIKSAGFPSGKYLFAGVVDGRNIW 300
TYFAD+PAE+YKTL SL VT +GFDL+RG +TLDLIK FP GK LFAGVVDGRNIW
Sbjct: 289 ATYFADVPAEAYKTLMSLKCVTGFGFDLVRGLETLDLIK-MNFPRGKLLFAGVVDGRNIW 347
Query: 301 ADDLAASLTTLESLEAIVGKDKLVVSTSCSLMHTAVDLVNETKLDSEIKSWLAFAAQKVV 360
A+DL+ASL TL++LE IVGK+K+VVSTSCSL+HTAVDLVNE KLD E+KSWLAFAAQKVV
Sbjct: 348 ANDLSASLKTLQTLEDIVGKEKVVVSTSCSLLHTAVDLVNEMKLDKELKSWLAFAAQKVV 407
Query: 361 EVNALAKALAGQKDEXXXXXXXXXXXXXXXXXXVTNEEVQKAAAALKGSDHRRATNVSAR 420
EVNALAK+ +G KDE VTN VQ+ A+K SDH R+T VS R
Sbjct: 408 EVNALAKSFSGAKDEALFSSNSMRQASRRSSPRVTNAAVQQDVDAVKKSDHHRSTEVSVR 467
Query: 421 LDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKAKKISEEEYISAIKEEISKVVKIQE 480
L AQQKKLNLP LPTTTIGSFPQT +LRR+RRE+KAKKISE +Y+ IKEE KV+K+QE
Sbjct: 468 LQAQQKKLNLPALPTTTIGSFPQTTDLRRIRREFKAKKISEVDYVQTIKEEYEKVIKLQE 527
Query: 481 ELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMT 540
EL IDVLVHGE ERNDMVE+FGEQLSGFAFT+NGWVQSYGSRCVKPPIIYGD++RP MT
Sbjct: 528 ELGIDVLVHGEAERNDMVEFFGEQLSGFAFTSNGWVQSYGSRCVKPPIIYGDITRPKAMT 587
Query: 541 VFWSKLAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKKEVEDLEAGGI 600
VFWS +AQ MT RPMKGMLTGPVTILNWSFVRNDQPR ETC+QIALAIK EVEDLE G+
Sbjct: 588 VFWSSMAQKMTQRPMKGMLTGPVTILNWSFVRNDQPRHETCFQIALAIKDEVEDLEKAGV 647
Query: 601 QVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHS 660
VIQIDEAALREGLPLRK+E FYLDWAVH+FRITN GVQD+TQIHTHMCYSNFNDIIHS
Sbjct: 648 TVIQIDEAALREGLPLRKSEQKFYLDWAVHAFRITNSGVQDSTQIHTHMCYSNFNDIIHS 707
Query: 661 IINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKML 720
II+MDADVITIENSRSDEKLLSVF EGVKYGAGIGPGVYDIHSPRIPSTEEIA+R+NKML
Sbjct: 708 IIDMDADVITIENSRSDEKLLSVFHEGVKYGAGIGPGVYDIHSPRIPSTEEIAERINKML 767
Query: 721 AVLDTNILWVNPDCGLKTRKYNEVKPALTNMVSAAKLIRTQL 762
AVLD+ +LWVNPDCGLKTR Y+EVK AL+NMV+AAKLIR+QL
Sbjct: 768 AVLDSKVLWVNPDCGLKTRNYSEVKSALSNMVAAAKLIRSQL 809
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,543,553
Number of extensions: 643783
Number of successful extensions: 1670
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1662
Number of HSP's successfully gapped: 3
Length of query: 766
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 660
Effective length of database: 8,200,473
Effective search space: 5412312180
Effective search space used: 5412312180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)