Os12g0621700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0621700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.53 | 0.578 | 5.4 | 0.212 | 1.46 | 1.32 | -1.26 | -1.59 | -0.323 | 21.4 | 21.68 | 1830 | -- | -- |
| 158.47 | 0.586 | 5.43 | -0.0215 | 1.48 | 1.57 | -1.08 | -- | -0.316 | 21.2 | 21.6 | 1829 | -- | -- |
| 157.33 | 0.584 | 5.4 | 0.229 | 1.47 | 1.33 | -- | -1.5 | -0.328 | 21.4 | 21.63 | 1833 | -- | -- |
| 162.16 | 0.593 | 5.44 | -0.147 | 1.51 | 1.46 | -- | -- | -0.409 | 21.4 | 21.6 | 1849 | -- | -- |
| 256.27 | 0.75 | 5.42 | -0.234 | -- | 1.15 | -- | -0.956 | -0.505 | -- | 21.7 | 1588 | -- | -- |
| 218.27 | 0.693 | 5.55 | -0.874 | 1.42 | -- | -1.17 | -- | -0.86 | 21.4 | -- | -- | -- | -- |
| 223.3 | 0.7 | 5.55 | -0.831 | 1.43 | -- | -- | -- | -0.859 | 21.4 | -- | -- | -- | -- |
| 261.85 | 0.757 | 5.45 | -0.475 | -- | 1.17 | -- | -- | -0.562 | -- | 21.7 | 1588 | -- | -- |
| 162.77 | 0.594 | 5.45 | -- | 1.48 | 1.49 | -- | -- | -0.392 | 21.4 | 21.5 | 1856 | -- | -- |
| 342.38 | 0.865 | 5.51 | -0.822 | -- | -- | -- | -- | -0.863 | -- | -- | -- | -- | -- |
| 241.49 | 0.727 | 5.53 | -- | 1.42 | -- | -- | -- | -0.766 | 21.4 | -- | -- | -- | -- |
| 267.59 | 0.764 | 5.43 | -- | -- | 1.23 | -- | -- | -0.495 | -- | 21.7 | 1588 | -- | -- |
| 360.22 | 0.886 | 5.49 | -- | -- | -- | -- | -- | -0.772 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 14 | 151.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 25 | 152.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 28 | 152.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 33 | 152.49 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 49 | 152.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 57 | 152.93 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 59 | 152.97 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 73 | 153.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 81 | 153.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 92 | 153.43 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 95 | 153.48 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 99 | 153.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 107 | 153.53 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 110 | 153.55 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 111 | 153.55 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 124 | 153.64 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 131 | 153.71 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 133 | 153.74 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 140 | 153.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 147 | 153.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 212 | 154.37 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 213 | 154.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 227 | 154.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 234 | 154.53 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 235 | 154.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 244 | 154.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 377 | 155.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 454 | 155.52 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 467 | 155.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 579 | 155.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 656 | 156.21 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 713 | 156.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 904 | 157.07 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 23 |
| 907 | 157.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |