Os12g0613600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os12g0613600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.14 | 0.587 | 10.1 | 0.607 | 0.612 | 1.78 | 0.79 | 1.16 | -0.504 | 9.08 | 22.2 | 1961 | -- | -- |
| 159.3 | 0.588 | 10.1 | 0.955 | 0.624 | 1.74 | 0.899 | -- | -0.413 | 9.03 | 22.3 | 1935 | -- | -- |
| 158.23 | 0.586 | 10.1 | 0.624 | 0.61 | 1.79 | -- | 1.21 | -0.502 | 9.29 | 22.2 | 1962 | -- | -- |
| 161.85 | 0.593 | 10.1 | 1.03 | 0.6 | 1.78 | -- | -- | -0.405 | 9.3 | 22.27 | 1979 | -- | -- |
| 177.07 | 0.62 | 10.1 | 0.594 | -- | 1.83 | -- | 1.31 | -0.471 | -- | 22.45 | 2232 | -- | -- |
| 275.14 | 0.778 | 10.2 | 0.289 | 0.703 | -- | 0.854 | -- | -1.03 | 9.16 | -- | -- | -- | -- |
| 277.59 | 0.78 | 10.2 | 0.321 | 0.697 | -- | -- | -- | -1.02 | 9.42 | -- | -- | -- | -- |
| 180.22 | 0.625 | 10.1 | 1.04 | -- | 1.82 | -- | -- | -0.351 | -- | 22.4 | 2230 | -- | -- |
| 185.53 | 0.634 | 10.1 | -- | 0.628 | 1.5 | -- | -- | -0.591 | 9.25 | 22.4 | 1926 | -- | -- |
| 306.11 | 0.818 | 10.2 | 0.317 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 280.31 | 0.783 | 10.2 | -- | 0.697 | -- | -- | -- | -1.06 | 9.39 | -- | -- | -- | -- |
| 205.87 | 0.668 | 10.1 | -- | -- | 1.55 | -- | -- | -0.545 | -- | 22.51 | 2213 | -- | -- |
| 308.76 | 0.82 | 10.2 | -- | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 157.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 5 | 158.12 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 7 | 158.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 11 | 158.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 24 | 158.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 57 | 158.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 151 | 159.85 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 576 | 163.12 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 612 | 163.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 739 | 164.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 865 | 165.11 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 921 | 165.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |