Os12g0605400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CROC-1-like protein (Fragment).
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Os12g0605400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CROC-1-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.4 | 0.241 | 12.6 | -0.612 | 0.403 | 0.195 | -0.132 | -1.61 | -0.187 | 5.52 | 21.4 | 3714 | -- | -- |
| 28.72 | 0.25 | 12.5 | -0.392 | 0.408 | 0.522 | -0.155 | -- | -0.157 | 5.41 | 21.25 | 11290 | -- | -- |
| 26.44 | 0.239 | 12.6 | -0.615 | 0.403 | 0.199 | -- | -1.61 | -0.188 | 5.55 | 21.35 | 3771 | -- | -- |
| 28.3 | 0.248 | 12.5 | -0.461 | 0.402 | 0.61 | -- | -- | -0.177 | 5.48 | 19.72 | 11288 | -- | -- |
| 34.85 | 0.275 | 12.6 | -0.623 | -- | 0.217 | -- | -1.58 | -0.183 | -- | 21.4 | 3847 | -- | -- |
| 33.91 | 0.273 | 12.5 | -0.00702 | 0.409 | -- | -0.176 | -- | 0.0258 | 5.36 | -- | -- | -- | -- |
| 33.98 | 0.273 | 12.5 | -0.00721 | 0.408 | -- | -- | -- | 0.0267 | 5.43 | -- | -- | -- | -- |
| 36.57 | 0.282 | 12.5 | -0.517 | -- | 0.658 | -- | -- | -0.171 | -- | 19.8 | 11288 | -- | -- |
| 30.55 | 0.257 | 12.5 | -- | 0.398 | 0.289 | -- | -- | -0.0743 | 5.61 | 22.88 | 6530 | -- | -- |
| 42.67 | 0.305 | 12.5 | 0.0065 | -- | -- | -- | -- | 0.0367 | -- | -- | -- | -- | -- |
| 33.99 | 0.273 | 12.5 | -- | 0.408 | -- | -- | -- | 0.0275 | 5.43 | -- | -- | -- | -- |
| 38.33 | 0.288 | 12.5 | -- | -- | 0.319 | -- | -- | -0.0382 | -- | 25.54 | 7032 | -- | -- |
| 42.67 | 0.305 | 12.5 | -- | -- | -- | -- | -- | 0.036 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.17 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 25.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 4 | 25.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 6 | 25.24 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 17 | 25.29 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 18 | 25.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 29 | 25.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 51 | 25.36 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 57 | 25.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 66 | 25.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 11 |
| 68 | 25.40 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 81 | 25.41 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 95 | 25.43 | humidity | 90.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 97 | 25.43 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 119 | 25.46 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 120 | 25.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 125 | 25.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 128 | 25.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 13 |
| 147 | 25.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 150 | 25.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 153 | 25.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 164 | 25.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 165 | 25.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 166 | 25.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 171 | 25.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 172 | 25.51 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 177 | 25.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 197 | 25.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 199 | 25.53 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 200 | 25.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 205 | 25.53 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 207 | 25.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 208 | 25.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 220 | 25.55 | humidity | 80.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 231 | 25.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 269 | 25.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 278 | 25.60 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 302 | 25.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 304 | 25.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 326 | 25.63 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 368 | 25.66 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 376 | 25.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 390 | 25.67 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 403 | 25.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 404 | 25.68 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 409 | 25.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 416 | 25.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 420 | 25.69 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 432 | 25.70 | humidity | 80.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 456 | 25.71 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 532 | 25.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 18 |
| 547 | 25.76 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 552 | 25.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 558 | 25.76 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 561 | 25.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 588 | 25.78 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 595 | 25.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 621 | 25.79 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 634 | 25.80 | humidity | 90.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 642 | 25.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 657 | 25.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 663 | 25.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 714 | 25.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 730 | 25.84 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 783 | 25.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 785 | 25.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 788 | 25.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 797 | 25.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 822 | 25.87 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 859 | 25.89 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 861 | 25.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 912 | 25.91 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 914 | 25.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 938 | 25.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 978 | 25.93 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 19 |