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Os12g0600200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.35 (0.0155) R2 : 0.601
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.972 (0.0371) R2dC : 0.603 R2C : 0.601
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0166 (0.0325) R2dN8 : 0.000294 R2N8 : -0.00248
σ : 0.292
deviance : 38.83
__
_____
C
peak time of C : 22.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34 0.274 8.34 -0.112 0.949 -0.453 -0.0861 0.918 0.0627 22.9 1004 36 -- --
35.3 0.277 8.33 -0.0931 0.952 -0.463 -0.123 -- 0.0568 22.9 1004 43 -- --
34.03 0.272 8.34 -0.11 0.949 -0.454 -- 0.927 0.0629 22.9 1004 36 -- --
35.3 0.279 8.33 -0.0884 0.955 -0.486 -- -- 0.0567 22.9 1005 26 -- --
87.02 0.434 8.31 -0.117 -- -0.674 -- 0.948 0.104 -- 1005 403 -- --
38.57 0.291 8.35 -0.0818 0.972 -- -0.164 -- -0.0255 22.8 -- -- -- --
38.69 0.291 8.35 -0.0751 0.972 -- -- -- -0.025 22.8 -- -- -- --
88.65 0.439 8.3 -0.1 -- -0.714 -- -- 0.108 -- 1005 410 -- --
35.5 0.279 8.33 -- 0.955 -0.481 -- -- 0.0657 22.9 1005 26 -- --
97.22 0.461 8.33 -0.0552 -- -- -- -- -0.019 -- -- -- -- --
38.83 0.292 8.35 -- 0.972 -- -- -- -0.0166 22.8 -- -- -- --
88.89 0.439 8.3 -- -- -0.708 -- -- 0.117 -- 1005 409 -- --
97.3 0.46 8.33 -- -- -- -- -- -0.0128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.95 radiation 1.0 1440 > th dose independent rect. 10 3
3 31.33 radiation 1.0 1440 > th dose independent rect. 12 1
9 31.71 radiation 1.0 1440 < th dose independent rect. 11 2
10 31.71 radiation 1.0 1440 < th dose dependent rect. 11 2
33 32.08 humidity 90.0 720 > th dose dependent rect. 20 1
37 32.15 precipitation 0.1 270 > th dose independent rect. 2 2
38 32.18 humidity 60.0 14400 > th dose independent rect. 7 1
39 32.18 precipitation 0.1 270 > th dose dependent rect. 2 2
40 32.21 humidity 60.0 14400 > th dose independent rect. 20 7
41 32.21 temperature 20.0 30 > th dose independent rect. 12 18
48 32.29 humidity 60.0 14400 > th dose independent rect. 20 5
53 32.40 precipitation 0.1 270 > th dose independent rect. 23 5
55 32.44 precipitation 0.1 270 > th dose dependent rect. 23 5
64 32.60 temperature 20.0 10 > th dose independent rect. 14 16
70 32.70 temperature 30.0 270 < th dose dependent rect. 6 18
73 32.71 atmosphere 1015.0 10 < th dose dependent rect. 14 16
74 32.71 atmosphere 1010.0 10 < th dose dependent rect. 14 18
75 32.73 humidity 60.0 14400 > th dose independent rect. 20 12
79 32.76 humidity 60.0 14400 < th dose independent rect. 6 1
81 32.76 humidity 60.0 14400 < th dose independent rect. 20 1
83 32.76 radiation 20.0 14400 > th dose independent rect. 17 1
134 32.76 humidity 60.0 14400 < th dose dependent rect. 6 1
136 32.76 humidity 60.0 14400 < th dose dependent rect. 20 1
138 32.76 radiation 20.0 14400 > th dose dependent rect. 17 1
190 32.76 atmosphere 1010.0 90 < th dose dependent rect. 13 19
191 32.76 atmosphere 1010.0 10 < th dose dependent rect. 12 20
197 32.79 temperature 30.0 90 < th dose dependent rect. 8 17
247 33.00 atmosphere 995.0 10 > th dose dependent rect. 6 21
270 33.14 temperature 30.0 30 < th dose dependent rect. 6 19
296 33.26 temperature 30.0 30 < th dose independent rect. 6 19
299 33.27 temperature 10.0 270 > th dose dependent rect. 12 15
337 33.38 temperature 30.0 270 < th dose independent rect. 4 20
345 33.40 atmosphere 995.0 30 > th dose dependent rect. 6 19
346 33.41 radiation 1.0 90 > th dose independent sin 3 NA
347 33.41 radiation 1.0 90 < th dose independent sin 4 NA
349 33.41 temperature 15.0 30 > th dose dependent rect. 12 18
371 33.47 atmosphere 1005.0 90 < th dose independent rect. 15 17
377 33.49 wind 1.0 1440 > th dose independent rect. 23 1
384 33.50 atmosphere 1015.0 30 < th dose dependent rect. 7 23
391 33.53 temperature 30.0 30 < th dose independent rect. 6 21
406 33.55 temperature 10.0 270 > th dose dependent rect. 21 22
412 33.56 atmosphere 1005.0 90 < th dose independent rect. 13 19
413 33.56 humidity 80.0 10 > th dose dependent rect. 24 9
433 33.60 temperature 10.0 270 > th dose dependent rect. 9 10
445 33.62 atmosphere 1005.0 90 > th dose independent rect. 5 21
446 33.62 temperature 10.0 270 > th dose dependent sin 20 NA
447 33.62 radiation 10.0 1440 < th dose dependent rect. 11 8
459 33.63 atmosphere 1005.0 10 > th dose independent rect. 6 21
483 33.65 radiation 10.0 1440 < th dose dependent rect. 13 6
489 33.65 atmosphere 1005.0 90 > th dose dependent rect. 11 23
516 33.67 radiation 10.0 1440 < th dose dependent rect. 13 14
560 33.72 temperature 30.0 90 < th dose dependent rect. 11 14
598 33.76 temperature 20.0 1440 < th dose dependent rect. 3 2
607 33.76 temperature 10.0 270 > th dose dependent rect. 7 23
609 33.77 radiation 1.0 90 > th dose independent rect. 4 11
622 33.77 atmosphere 1010.0 270 < th dose dependent rect. 23 7
623 33.77 temperature 30.0 90 < th dose dependent rect. 17 8
653 33.81 humidity 90.0 30 > th dose independent rect. 1 9
669 33.81 atmosphere 1005.0 270 > th dose dependent rect. 14 19
677 33.82 radiation 1.0 90 < th dose dependent sin 3 NA
688 33.84 temperature 30.0 270 < th dose independent rect. 15 9
724 33.86 temperature 10.0 270 > th dose dependent rect. 10 23
728 33.87 atmosphere 1005.0 270 > th dose independent rect. 16 17
732 33.87 atmosphere 1005.0 10 < th dose dependent rect. 1 7
739 33.87 atmosphere 1005.0 90 > th dose dependent rect. 13 22
754 33.89 temperature 20.0 1440 < th dose independent rect. 23 5
755 33.89 humidity 90.0 30 < th dose independent rect. 20 16
772 33.90 radiation 10.0 1440 < th dose dependent sin 16 NA
783 33.90 atmosphere 1005.0 10 > th dose dependent rect. 13 23
796 33.92 temperature 20.0 1440 < th dose independent rect. 23 2
798 33.92 temperature 20.0 1440 > th dose independent rect. 23 5
816 33.93 atmosphere 1005.0 270 > th dose independent rect. 16 8
848 33.95 temperature 20.0 10 > th dose independent rect. 12 21
850 33.95 temperature 30.0 270 < th dose dependent sin 20 NA
894 33.97 atmosphere 995.0 270 > th dose dependent rect. 16 8
909 33.98 radiation 1.0 90 < th dose independent rect. 1 12
910 33.98 radiation 1.0 90 < th dose independent rect. 1 14
932 33.99 radiation 1.0 90 < th dose independent rect. 1 7
964 34.00 atmosphere 995.0 43200 < th dose dependent rect. 11 18