Os12g0597800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os12g0597800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.47 | 0.356 | 3.31 | 0.169 | 0.268 | 0.24 | 0.0255 | 1.33 | -0.0506 | 7.83 | 87 | 4925 | -- | -- |
| 59.7 | 0.36 | 3.31 | 0.111 | 0.238 | 0.311 | -0.153 | -- | -0.085 | 7.52 | 88 | 5856 | -- | -- |
| 57.14 | 0.352 | 3.32 | 0.203 | 0.241 | 0.262 | -- | 1.36 | -0.059 | 7.83 | 89 | 5913 | -- | -- |
| 59.74 | 0.36 | 3.31 | 0.111 | 0.235 | 0.314 | -- | -- | -0.0912 | 7.76 | 89 | 5785 | -- | -- |
| 60.25 | 0.362 | 3.32 | 0.184 | -- | 0.271 | -- | 1.33 | -0.0575 | -- | 88.4 | 5851 | -- | -- |
| 60.97 | 0.366 | 3.3 | 0.0892 | 0.239 | -- | -0.139 | -- | -0.0282 | 7.68 | -- | -- | -- | -- |
| 61.02 | 0.366 | 3.3 | 0.0862 | 0.238 | -- | -- | -- | -0.0278 | 7.83 | -- | -- | -- | -- |
| 62.75 | 0.369 | 3.32 | 0.106 | -- | 0.322 | -- | -- | -0.094 | -- | 88.61 | 5768 | -- | -- |
| 60.01 | 0.361 | 3.32 | -- | 0.235 | 0.298 | -- | -- | -0.0966 | 7.88 | 88 | 5746 | -- | -- |
| 64.1 | 0.374 | 3.31 | 0.0889 | -- | -- | -- | -- | -0.0245 | -- | -- | -- | -- | -- |
| 61.21 | 0.366 | 3.3 | -- | 0.239 | -- | -- | -- | -0.0374 | 7.8 | -- | -- | -- | -- |
| 63.04 | 0.37 | 3.32 | -- | -- | 0.302 | -- | -- | -0.0941 | -- | 87.86 | 5755 | -- | -- |
| 64.3 | 0.374 | 3.31 | -- | -- | -- | -- | -- | -0.0344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.53 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 6 | 55.72 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 8 | 55.93 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 9 | 55.93 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 10 | 55.93 | humidity | 70 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 16 | 55.95 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 19 | 55.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 23 | 56.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 24 | 56.27 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 38 | 56.68 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 39 | 56.68 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 65 | 56.68 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 106 | 56.85 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 115 | 56.91 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 126 | 56.93 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 129 | 56.96 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 130 | 56.97 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 151 | 57.04 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 185 | 57.10 | humidity | 70 | 4320 | > th | dose independent | sin | 6 | NA |
| 197 | 57.15 | humidity | 50 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 205 | 57.15 | humidity | 50 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 207 | 57.16 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 222 | 57.16 | humidity | 90 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 290 | 57.22 | humidity | 70 | 4320 | < th | dose independent | sin | 6 | NA |
| 336 | 57.23 | humidity | 80 | 4320 | < th | dose dependent | rect. | 21 | 16 |
| 357 | 57.25 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 373 | 57.27 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 400 | 57.28 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 414 | 57.29 | humidity | 80 | 4320 | < th | dose dependent | sin | 5 | NA |
| 423 | 57.30 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 424 | 57.30 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 2 |
| 487 | 57.34 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 499 | 57.35 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 512 | 57.36 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 526 | 57.37 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 554 | 57.38 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 587 | 57.40 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 680 | 57.43 | humidity | 70 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 709 | 57.44 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 725 | 57.44 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 727 | 57.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 772 | 57.46 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 773 | 57.46 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 8 |
| 798 | 57.47 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 5 |
| 846 | 57.49 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 883 | 57.50 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 948 | 57.51 | humidity | 90 | 90 | < th | dose independent | rect. | 1 | 6 |