Os12g0596600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0596600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.95 | 0.293 | 8.4 | -1.51 | 0.6 | -0.839 | 0.0985 | -0.424 | -0.0403 | 3.09 | 22.5 | 1777 | -- | -- |
| 39.44 | 0.293 | 8.4 | -1.63 | 0.614 | -0.834 | 0.163 | -- | -0.0641 | 3.06 | 22.5 | 1774 | -- | -- |
| 38.98 | 0.291 | 8.4 | -1.51 | 0.601 | -0.839 | -- | -0.421 | -0.0409 | 3.09 | 22.48 | 1777 | -- | -- |
| 39.4 | 0.292 | 8.41 | -1.65 | 0.601 | -0.838 | -- | -- | -0.0777 | 3.11 | 22.5 | 1777 | -- | -- |
| 57.14 | 0.352 | 8.4 | -1.53 | -- | -0.897 | -- | -0.412 | -0.0525 | -- | 22.4 | 2346 | -- | -- |
| 67.43 | 0.385 | 8.34 | -1.34 | 0.605 | -- | 0.0523 | -- | 0.223 | 3.01 | -- | -- | -- | -- |
| 67.43 | 0.385 | 8.34 | -1.34 | 0.605 | -- | -- | -- | 0.222 | 3.01 | -- | -- | -- | -- |
| 54.01 | 0.342 | 8.42 | -1.72 | -- | -0.993 | -- | -- | -0.0958 | -- | 24.13 | 2599 | -- | -- |
| 104.91 | 0.48 | 8.34 | -- | 0.679 | -0.389 | -- | -- | 0.261 | 2.52 | 22.5 | 1777 | -- | -- |
| 88.41 | 0.439 | 8.34 | -1.31 | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
| 114.65 | 0.501 | 8.31 | -- | 0.579 | -- | -- | -- | 0.372 | 3 | -- | -- | -- | -- |
| 123 | 0.517 | 8.35 | -- | -- | -0.514 | -- | -- | 0.226 | -- | 24.2 | 2503 | -- | -- |
| 133.86 | 0.54 | 8.31 | -- | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.04 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 2 | 38.19 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 6 | 38.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 7 | 38.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 18 | 38.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 22 | 38.66 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 34 | 38.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 41 | 38.91 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 54 | 39.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 111 | 39.17 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 133 | 39.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 147 | 39.27 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 17 |
| 196 | 39.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 224 | 39.46 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 346 | 39.74 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 371 | 39.80 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 415 | 39.87 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 568 | 40.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 855 | 40.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |