Os12g0581900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os12g0581900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.59 | 0.43 | 9.7 | -1.18 | 0.966 | 0.655 | -0.109 | -0.507 | -0.278 | 7.09 | 24.6 | 396 | -- | -- |
| 84.08 | 0.427 | 9.73 | -1.32 | 0.951 | 0.647 | -0.369 | -- | -0.325 | 6.82 | 24.7 | 451 | -- | -- |
| 83.56 | 0.426 | 9.7 | -1.17 | 0.964 | 0.658 | -- | -0.53 | -0.278 | 7.07 | 24.6 | 408 | -- | -- |
| 84.39 | 0.428 | 9.72 | -1.34 | 0.96 | 0.647 | -- | -- | -0.33 | 6.99 | 24.8 | 440 | -- | -- |
| 106.4 | 0.48 | 9.67 | -0.877 | -- | 1.22 | -- | -1.27 | -0.041 | -- | 25.6 | 421 | -- | -- |
| 102.77 | 0.475 | 9.78 | -1.54 | 1.3 | -- | -0.337 | -- | -0.621 | 6.83 | -- | -- | -- | -- |
| 103.05 | 0.475 | 9.78 | -1.54 | 1.3 | -- | -- | -- | -0.62 | 6.87 | -- | -- | -- | -- |
| 108.91 | 0.486 | 9.72 | -1.14 | -- | 1.23 | -- | -- | -0.239 | -- | 25.9 | 499 | -- | -- |
| 127.76 | 0.526 | 9.69 | -- | 1.09 | 0.738 | -- | -- | -0.169 | 7.24 | 24.1 | 318 | -- | -- |
| 191.45 | 0.647 | 9.81 | -1.51 | -- | -- | -- | -- | -0.595 | -- | -- | -- | -- | -- |
| 165.79 | 0.602 | 9.74 | -- | 1.28 | -- | -- | -- | -0.448 | 6.94 | -- | -- | -- | -- |
| 143.55 | 0.558 | 9.7 | -- | -- | 1.4 | -- | -- | -0.102 | -- | 26.2 | 539 | -- | -- |
| 252 | 0.741 | 9.77 | -- | -- | -- | -- | -- | -0.427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 8 | 79.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 20 | 80.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 35 | 81.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 11 |
| 52 | 81.67 | temperature | 25 | 270 | < th | dose dependent | sin | 20 | NA |
| 53 | 81.72 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 21 |
| 65 | 81.93 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 19 |
| 67 | 81.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 75 | 82.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 127 | 82.88 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 19 |
| 132 | 82.92 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 17 |
| 248 | 83.94 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 11 |
| 252 | 83.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 267 | 84.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 286 | 84.15 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 13 |
| 300 | 84.24 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 12 |
| 301 | 84.24 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 322 | 84.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 336 | 84.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 351 | 84.47 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 22 |
| 364 | 84.53 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 23 |
| 437 | 84.75 | temperature | 25 | 270 | > th | dose independent | sin | 20 | NA |
| 447 | 84.79 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 22 |
| 491 | 84.93 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 17 |
| 495 | 84.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 515 | 85.01 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 542 | 85.07 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 545 | 85.07 | temperature | 15 | 720 | > th | dose dependent | sin | 21 | NA |
| 554 | 85.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 575 | 85.15 | temperature | 25 | 270 | < th | dose independent | sin | 19 | NA |
| 603 | 85.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 609 | 85.24 | temperature | 20 | 10 | > th | dose independent | rect. | 10 | 19 |
| 623 | 85.25 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 652 | 85.35 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 677 | 85.42 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 682 | 85.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 744 | 85.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 760 | 85.65 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 14 |
| 812 | 85.76 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 827 | 85.77 | temperature | 10 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 855 | 85.86 | temperature | 20 | 10 | > th | dose independent | sin | 18 | NA |
| 867 | 85.89 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 13 |
| 885 | 85.92 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 904 | 85.95 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 915 | 85.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 919 | 85.97 | temperature | 10 | 10 | > th | dose dependent | sin | 17 | NA |
| 928 | 86.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 997 | 86.16 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 23 |
| 998 | 86.16 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 23 |