BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0581900 Os12g0581900|AK066117
(195 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24625.1 | chr1:8726009-8726638 REVERSE LENGTH=210 85 3e-17
AT1G80730.1 | chr1:30339493-30340179 REVERSE LENGTH=229 72 2e-13
AT5G25160.1 | chr5:8687524-8688231 FORWARD LENGTH=236 71 3e-13
AT1G66140.1 | chr1:24620063-24620845 REVERSE LENGTH=261 71 4e-13
AT5G10970.1 | chr5:3469268-3470086 FORWARD LENGTH=273 68 4e-12
AT5G01860.1 | chr5:335630-336277 FORWARD LENGTH=216 67 5e-12
AT5G14010.1 | chr5:4522260-4522745 FORWARD LENGTH=162 65 2e-11
AT5G57520.1 | chr5:23296019-23296471 FORWARD LENGTH=151 65 3e-11
AT3G58070.1 | chr3:21506845-21507606 REVERSE LENGTH=254 55 2e-08
AT2G41940.1 | chr2:17507556-17508329 FORWARD LENGTH=258 55 2e-08
AT5G06650.1 | chr5:2043486-2044061 FORWARD LENGTH=192 53 8e-08
AT5G27880.1 | chr5:9885908-9886744 FORWARD LENGTH=279 52 1e-07
AT1G67030.1 | chr1:25016644-25017237 FORWARD LENGTH=198 51 5e-07
AT5G48890.1 | chr5:19820353-19820874 FORWARD LENGTH=174 51 5e-07
AT5G05120.1 | chr5:1511232-1511837 FORWARD LENGTH=202 50 6e-07
AT1G68360.1 | chr1:25621678-25622412 REVERSE LENGTH=245 50 8e-07
AT4G17810.1 | chr4:9906918-9907532 FORWARD LENGTH=205 50 1e-06
AT5G06070.1 | chr5:1828426-1829106 REVERSE LENGTH=227 47 7e-06
AT2G37740.1 | chr2:15827706-15828620 REVERSE LENGTH=305 47 8e-06
>AT1G24625.1 | chr1:8726009-8726638 REVERSE LENGTH=210
Length = 209
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 27/141 (19%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMM-----------MGLPLEA 118
+VFSCN+C RKF+SSQALGGHQNAHKRER+ AKR+ H RM L ++A
Sbjct: 57 RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQA 116
Query: 119 HAAFVHSLRVNQSSVIQKASQQAQI-RTAPRFHEGSISWPPIAYEEVPNS-TWPGSFRLR 176
H+ +H ++ + Q T P F + Y++ + WPGSFR
Sbjct: 117 HSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFD---------YDDGGSDFFWPGSFRQV 167
Query: 177 SQPSDQP-----SEQSKIDLN 192
+ ++ P S +S +DLN
Sbjct: 168 VEEAEAPVVVVASTESGLDLN 188
>AT1G80730.1 | chr1:30339493-30340179 REVERSE LENGTH=229
Length = 228
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMGLPLEAHA 120
+VFSCN+C RKF+SSQALGGHQNAHKRER+ AKR + + + LP A A
Sbjct: 66 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFA 116
>AT5G25160.1 | chr5:8687524-8688231 FORWARD LENGTH=236
Length = 235
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRM-----MMGLPLEAHAAFVH 124
K+FSCN+C R F+SSQALGGHQNAHKRER+ AKR QRM G P H
Sbjct: 59 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR---GQRMAASASAFGHPYGFSPLPFH 115
Query: 125 SLRVNQSSV-IQKASQQAQIRTAPRF--HEGSISWPPIAYEEVP 165
N S+ IQ S ++ + F H G I+W + +++ P
Sbjct: 116 GQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQP 159
>AT1G66140.1 | chr1:24620063-24620845 REVERSE LENGTH=261
Length = 260
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 37/139 (26%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMG---------------- 113
+VFSCN+C RKF+SSQALGGHQNAHKRER+ AKR A RM +
Sbjct: 83 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR---AMRMGLAGVFPGRGSSSNYAAAA 139
Query: 114 -------LPL----EAHAAFVHSLRVNQSSVIQKASQQAQ-----IRTAPRFHEGSIS-- 155
LPL + +L + S S Q IR RF++G
Sbjct: 140 TAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNC 199
Query: 156 WPPIAYEEVPNSTWPGSFR 174
P ++ WPGSFR
Sbjct: 200 IPFYVEDDEAEMLWPGSFR 218
>AT5G10970.1 | chr5:3469268-3470086 FORWARD LENGTH=273
Length = 272
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 9/55 (16%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMGLPLEAHAAFVH 124
K+FSCN+C R F+SSQALGGHQNAHKRER+ AKR QRM + AAF H
Sbjct: 102 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR---GQRMA------SAAAFGH 147
>AT5G01860.1 | chr5:335630-336277 FORWARD LENGTH=216
Length = 215
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 31/154 (20%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMGLP-LEAHAAFV----- 123
+VF+C FC ++F +SQALGGHQNAHK+ERS AKR + + + P L ++ +
Sbjct: 65 RVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRR---KEIEINYPELSIYSQYPPSGLS 121
Query: 124 -------HSLRVNQSSVIQKASQQAQIRT-APRF-HEGSISWPPIAYEEVPN-------- 166
+ L V + I K ++ A RF + G +++PP+++ VP
Sbjct: 122 FSSSSSQYDLGVRYNPNIAKTTKPYPFNIFACRFGYRGGLNFPPMSHLSVPKTDDLSINL 181
Query: 167 -STWPGSFR----LRSQPSDQPSEQSKIDLNLRL 195
S GS + QP P + S IDL+L+L
Sbjct: 182 ISNLEGSIHDQAVKKDQPEADPCKDSDIDLSLKL 215
>AT5G14010.1 | chr5:4522260-4522745 FORWARD LENGTH=162
Length = 161
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 33/36 (91%)
Query: 69 HKVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRS 104
H++F C +C RKF++SQALGGHQNAHKRER+AA+R+
Sbjct: 35 HRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70
>AT5G57520.1 | chr5:23296019-23296471 FORWARD LENGTH=151
Length = 150
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRS 104
+VFSCN+C RKF+SSQALGGHQNAHK ER+ AK+S
Sbjct: 50 RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84
>AT3G58070.1 | chr3:21506845-21507606 REVERSE LENGTH=254
Length = 253
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 69 HKVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKR 103
++ F C++C R F +SQALGGHQNAHKRER AKR
Sbjct: 88 NRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122
>AT2G41940.1 | chr2:17507556-17508329 FORWARD LENGTH=258
Length = 257
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 26/32 (81%)
Query: 72 FSCNFCMRKFFSSQALGGHQNAHKRERSAAKR 103
F C++C R F +SQALGGHQNAHKRER AKR
Sbjct: 95 FECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126
>AT5G06650.1 | chr5:2043486-2044061 FORWARD LENGTH=192
Length = 191
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKR 103
K F C++C R F +SQALGGHQNAHKRER KR
Sbjct: 53 KRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKR 86
>AT5G27880.1 | chr5:9885908-9886744 FORWARD LENGTH=279
Length = 278
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 69 HKVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRSYHAQRMMMGL 114
+K+++C+FC + F +SQALGGHQNAHK+ER K+ + GL
Sbjct: 77 NKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEMEAEYPGL 122
>AT1G67030.1 | chr1:25016644-25017237 FORWARD LENGTH=198
Length = 197
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAKRS 104
+ + C +C R+F +SQALGGHQNAHK+ER KR+
Sbjct: 39 RKYECQYCCREFANSQALGGHQNAHKKERQLLKRA 73
>AT5G48890.1 | chr5:19820353-19820874 FORWARD LENGTH=174
Length = 173
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRE 97
++F C FC RKF SSQALGGHQNAHK+E
Sbjct: 33 RIFPCLFCSRKFHSSQALGGHQNAHKKE 60
>AT5G05120.1 | chr5:1511232-1511837 FORWARD LENGTH=202
Length = 201
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 71 VFSCNFCMRKFFSSQALGGHQNAHKRERSAAKR 103
++ C +C RKF +QALGGHQNAH++ER K+
Sbjct: 26 IYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQ 58
>AT1G68360.1 | chr1:25621678-25622412 REVERSE LENGTH=245
Length = 244
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 72 FSCNFCMRKFFSSQALGGHQNAHKRERSAAKRS 104
+ C +C R+F +SQALGGHQNAHK+ER KR+
Sbjct: 73 YECQYCCREFGNSQALGGHQNAHKKERQQLKRA 105
>AT4G17810.1 | chr4:9906918-9907532 FORWARD LENGTH=205
Length = 204
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 28/33 (84%)
Query: 70 KVFSCNFCMRKFFSSQALGGHQNAHKRERSAAK 102
+ ++CNFC R+F S+QALGGH N H+R+R++++
Sbjct: 44 RSYTCNFCRREFRSAQALGGHMNVHRRDRASSR 76
>AT5G06070.1 | chr5:1828426-1829106 REVERSE LENGTH=227
Length = 226
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 72 FSCNFCMRKFFSSQALGGHQNAHKRERSAAK 102
+SC+FC R+F S+QALGGH N H+R+R+ K
Sbjct: 55 YSCSFCGREFKSAQALGGHMNVHRRDRARLK 85
>AT2G37740.1 | chr2:15827706-15828620 REVERSE LENGTH=305
Length = 304
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 72 FSCNFCMRKFFSSQALGGHQNAHKRERSAAKRS 104
++C+FC R+F S+QALGGH N H+R+R+ K++
Sbjct: 39 YTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.125 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,942,646
Number of extensions: 91009
Number of successful extensions: 348
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 346
Number of HSP's successfully gapped: 20
Length of query: 195
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 102
Effective length of database: 8,556,881
Effective search space: 872801862
Effective search space used: 872801862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)