Os12g0563400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rhodanese-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0563400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Rhodanese-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.85 | 0.433 | 7.34 | 1.49 | 0.113 | -1.09 | 0.646 | 2.45 | 0.455 | 17.6 | 23.56 | 1361 | -- | -- |
| 89.92 | 0.442 | 7.43 | 0.812 | 0.167 | -0.87 | 0.597 | -- | 0.265 | 18 | 22.91 | 5580 | -- | -- |
| 84.45 | 0.428 | 7.35 | 1.46 | 0.232 | -1.2 | -- | 2.35 | 0.475 | 21.5 | 23.07 | 1184 | -- | -- |
| 87.36 | 0.435 | 7.43 | 0.771 | 0.219 | -0.969 | -- | -- | 0.281 | 21.4 | 22.96 | 1177 | -- | -- |
| 86.29 | 0.433 | 7.34 | 1.42 | -- | -1.11 | -- | 2.24 | 0.463 | -- | 23 | 1301 | -- | -- |
| 115.99 | 0.505 | 7.47 | 0.463 | 0.177 | -- | 0.727 | -- | 0.0932 | 17 | -- | -- | -- | -- |
| 117.26 | 0.507 | 7.46 | 0.463 | 0.187 | -- | -- | -- | 0.0965 | 17.8 | -- | -- | -- | -- |
| 89.3 | 0.44 | 7.42 | 0.767 | -- | -0.912 | -- | -- | 0.278 | -- | 22.86 | 1292 | -- | -- |
| 101.46 | 0.469 | 7.47 | -- | 0.198 | -0.759 | -- | -- | 0.0568 | 19.7 | 26.62 | 1170 | -- | -- |
| 119.06 | 0.51 | 7.46 | 0.457 | -- | -- | -- | -- | 0.0921 | -- | -- | -- | -- | -- |
| 122.91 | 0.519 | 7.48 | -- | 0.18 | -- | -- | -- | 0.0449 | 17.9 | -- | -- | -- | -- |
| 103.04 | 0.473 | 7.48 | -- | -- | -0.682 | -- | -- | 0.0366 | -- | 26.7 | 1260 | -- | -- |
| 124.58 | 0.521 | 7.47 | -- | -- | -- | -- | -- | 0.0413 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 5 | 83.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 6 | 83.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 7 | 83.42 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 29 | 83.82 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 36 | 83.86 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 66 | 84.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 79 | 84.30 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 108 | 84.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 202 | 85.02 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 204 | 85.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 205 | 85.06 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 262 | 85.32 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 289 | 85.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 293 | 85.52 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 296 | 85.54 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 299 | 85.57 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 319 | 85.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 419 | 86.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 466 | 86.14 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 488 | 86.19 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 525 | 86.27 | wind | 7 | 43200 | < th | dose independent | sin | 16 | NA |
| 570 | 86.34 | wind | 7 | 43200 | > th | dose independent | sin | 16 | NA |
| 571 | 86.34 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 631 | 86.46 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 718 | 86.66 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 773 | 86.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 811 | 86.93 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 86.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 827 | 86.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 848 | 87.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 880 | 87.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 889 | 87.11 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 947 | 87.22 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 948 | 87.22 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 966 | 87.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 973 | 87.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |