Os12g0541500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chloroplast polyprotein of elongation factor Ts.
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Os12g0541500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chloroplast polyprotein of elongation factor Ts.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.89 | 0.37 | 12.6 | 0.394 | 1.18 | 0.423 | -0.755 | -1.33 | -0.489 | 18.7 | 19.67 | 193 | -- | -- |
| 66.84 | 0.381 | 12.6 | 0.349 | 1.22 | 0.698 | -0.665 | -- | -0.49 | 18.7 | 19.4 | 268 | -- | -- |
| 63.26 | 0.37 | 12.6 | 0.392 | 1.18 | 0.456 | -- | -1.18 | -0.491 | 18.7 | 19.6 | 178 | -- | -- |
| 67.18 | 0.382 | 12.6 | 0.318 | 1.2 | 0.791 | -- | -- | -0.512 | 18.6 | 19.1 | 211 | -- | -- |
| 134.16 | 0.539 | 12.6 | 0.364 | -- | 0.41 | -- | -1.2 | -0.517 | -- | 19.75 | 45 | -- | -- |
| 78.21 | 0.415 | 12.6 | 0.0471 | 1.16 | -- | -0.608 | -- | -0.621 | 19 | -- | -- | -- | -- |
| 79.17 | 0.417 | 12.6 | 0.0592 | 1.16 | -- | -- | -- | -0.622 | 19 | -- | -- | -- | -- |
| 130.93 | 0.533 | 12.5 | 0.552 | -- | 1.24 | -- | -- | -0.444 | -- | 18 | 2883 | -- | -- |
| 69.27 | 0.388 | 12.6 | -- | 1.21 | 0.613 | -- | -- | -0.553 | 18.7 | 19.4 | 193 | -- | -- |
| 149.91 | 0.572 | 12.6 | 0.0356 | -- | -- | -- | -- | -0.643 | -- | -- | -- | -- | -- |
| 79.26 | 0.416 | 12.6 | -- | 1.16 | -- | -- | -- | -0.628 | 19 | -- | -- | -- | -- |
| 136.96 | 0.545 | 12.5 | -- | -- | 1.1 | -- | -- | -0.489 | -- | 17.5 | 2957 | -- | -- |
| 149.95 | 0.572 | 12.6 | -- | -- | -- | -- | -- | -0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 6 | 59.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 7 | 59.79 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 11 | 60.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 12 | 60.21 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 19 | 60.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 20 | 60.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 33 | 60.57 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 39 | 60.67 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 40 | 60.67 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 65 | 60.81 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 67 | 60.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 68 | 60.85 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 74 | 60.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 86 | 61.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 98 | 61.12 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 109 | 61.25 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 9 |
| 122 | 61.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 157 | 61.50 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 161 | 61.50 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 171 | 61.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 177 | 61.55 | humidity | 90.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 182 | 61.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 183 | 61.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 187 | 61.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 195 | 61.59 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 196 | 61.59 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 204 | 61.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 207 | 61.61 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 211 | 61.63 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 215 | 61.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 239 | 61.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 259 | 61.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 312 | 61.86 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 360 | 61.97 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 363 | 61.98 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 371 | 62.00 | temperature | 20.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 374 | 62.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 392 | 62.04 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 22 |
| 401 | 62.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 413 | 62.07 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 416 | 62.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 436 | 62.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 437 | 62.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 450 | 62.13 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 451 | 62.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 452 | 62.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 460 | 62.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 507 | 62.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 524 | 62.23 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 532 | 62.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 543 | 62.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 552 | 62.25 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 598 | 62.32 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 599 | 62.32 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 609 | 62.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 635 | 62.36 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 642 | 62.37 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 653 | 62.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 658 | 62.38 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 659 | 62.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 734 | 62.47 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 754 | 62.49 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 789 | 62.52 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 813 | 62.55 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 815 | 62.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 819 | 62.55 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 821 | 62.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 826 | 62.56 | temperature | 20.0 | 90 | > th | dose independent | no | NA | NA |
| 829 | 62.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 851 | 62.59 | temperature | 20.0 | 270 | < th | dose independent | sin | 10 | NA |
| 859 | 62.59 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 867 | 62.61 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 873 | 62.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 877 | 62.62 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 15 |
| 906 | 62.64 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 909 | 62.65 | humidity | 90.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 920 | 62.65 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 968 | 62.71 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 969 | 62.71 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 970 | 62.71 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 2 | 5 |