Os12g0538300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dor1-like protein family protein.
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Os12g0538300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dor1-like protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.22 | 0.171 | 10.4 | 0.477 | 0.195 | -0.298 | 0.0573 | -0.406 | 0.133 | 13.3 | 30 | 1196 | -- | -- |
| 13.28 | 0.17 | 10.4 | 0.435 | 0.19 | -0.337 | 0.0286 | -- | 0.155 | 13.2 | 30.39 | 1193 | -- | -- |
| 13.22 | 0.169 | 10.4 | 0.477 | 0.197 | -0.312 | -- | -0.411 | 0.129 | 13.1 | 29.9 | 1137 | -- | -- |
| 13.25 | 0.17 | 10.4 | 0.42 | 0.194 | -0.358 | -- | -- | 0.136 | 13.1 | 29.93 | 1134 | -- | -- |
| 15.19 | 0.182 | 10.4 | 0.439 | -- | -0.347 | -- | -0.197 | 0.0789 | -- | 29.5 | 1741 | -- | -- |
| 18.87 | 0.204 | 10.4 | 0.504 | 0.137 | -- | -0.0393 | -- | 0.0773 | 13.4 | -- | -- | -- | -- |
| 18.87 | 0.203 | 10.4 | 0.503 | 0.137 | -- | -- | -- | 0.0771 | 13.5 | -- | -- | -- | -- |
| 15.18 | 0.181 | 10.4 | 0.397 | -- | -0.364 | -- | -- | 0.0721 | -- | 29.51 | 1731 | -- | -- |
| 17.34 | 0.194 | 10.4 | -- | 0.187 | -0.406 | -- | -- | 0.107 | 12.6 | 29.9 | 1196 | -- | -- |
| 20.02 | 0.209 | 10.4 | 0.497 | -- | -- | -- | -- | 0.0742 | -- | -- | -- | -- | -- |
| 25.53 | 0.236 | 10.4 | -- | 0.128 | -- | -- | -- | 0.0212 | 13.3 | -- | -- | -- | -- |
| 19.12 | 0.204 | 10.4 | -- | -- | -0.439 | -- | -- | 0.035 | -- | 29.5 | 1732 | -- | -- |
| 26.54 | 0.24 | 10.4 | -- | -- | -- | -- | -- | 0.019 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.34 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 2 | 13.40 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 3 | 13.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 13.48 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 6 | 13.50 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 13 |
| 11 | 13.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 14 | 13.59 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 37 | 13.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 43 | 13.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 51 | 13.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 78 | 13.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 79 | 13.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 112 | 13.79 | temperature | 30 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 174 | 13.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 180 | 13.83 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 181 | 13.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 216 | 13.84 | temperature | 25 | 1440 | > th | dose dependent | sin | 4 | NA |
| 218 | 13.84 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 223 | 13.84 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 224 | 13.85 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 230 | 13.85 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 244 | 13.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 252 | 13.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 18 |
| 253 | 13.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 254 | 13.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 278 | 13.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 324 | 13.86 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 493 | 13.87 | temperature | 30 | 1440 | > th | dose independent | sin | 23 | NA |
| 498 | 13.87 | temperature | 30 | 1440 | < th | dose independent | sin | 22 | NA |
| 541 | 13.88 | temperature | 30 | 1440 | > th | dose independent | sin | 20 | NA |
| 750 | 13.92 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 929 | 13.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 949 | 13.94 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |