Os12g0511300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0511300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.98 | 0.332 | 6.52 | -0.781 | 0.528 | 1.38 | -0.16 | -0.587 | -0.119 | 10 | 14.9 | 611 | -- | -- |
| 50.21 | 0.33 | 6.51 | -0.686 | 0.527 | 1.38 | -0.0645 | -- | -0.0958 | 10 | 14.77 | 611 | -- | -- |
| 50.06 | 0.33 | 6.52 | -0.768 | 0.527 | 1.38 | -- | -0.479 | -0.116 | 9.96 | 14.87 | 598 | -- | -- |
| 50.23 | 0.33 | 6.51 | -0.685 | 0.531 | 1.38 | -- | -- | -0.0928 | 10 | 14.77 | 610 | -- | -- |
| 54.77 | 0.347 | 6.52 | -0.669 | -- | 1.29 | -- | -0.48 | -0.0817 | -- | 14.87 | 598 | -- | -- |
| 73.22 | 0.401 | 6.47 | -0.35 | 0.323 | -- | -0.066 | -- | 0.118 | 12.7 | -- | -- | -- | -- |
| 73.24 | 0.401 | 6.47 | -0.352 | 0.324 | -- | -- | -- | 0.118 | 12.7 | -- | -- | -- | -- |
| 54.97 | 0.347 | 6.51 | -0.601 | -- | 1.29 | -- | -- | -0.063 | -- | 14.77 | 610 | -- | -- |
| 61.16 | 0.364 | 6.48 | -- | 0.46 | 1.08 | -- | -- | 0.023 | 10.3 | 13.37 | 572 | -- | -- |
| 79.79 | 0.417 | 6.47 | -0.364 | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
| 76.5 | 0.409 | 6.46 | -- | 0.329 | -- | -- | -- | 0.157 | 12.8 | -- | -- | -- | -- |
| 63.96 | 0.374 | 6.49 | -- | -- | 1.1 | -- | -- | 0.025 | -- | 14.77 | 610 | -- | -- |
| 83.28 | 0.426 | 6.46 | -- | -- | -- | -- | -- | 0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 6 | 48.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 44 | 49.53 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 55 | 49.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 66 | 49.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 71 | 49.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 86 | 49.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 93 | 49.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 102 | 49.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 125 | 50.09 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 160 | 50.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 188 | 50.35 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 198 | 50.37 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 205 | 50.38 | temperature | 15 | 1440 | > th | dose dependent | sin | 6 | NA |
| 207 | 50.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 240 | 50.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 18 |
| 294 | 50.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 340 | 50.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 371 | 50.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 411 | 50.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 630 | 50.81 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 719 | 50.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 720 | 50.87 | temperature | 20 | 4320 | > th | dose dependent | sin | 16 | NA |
| 739 | 50.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 14 |
| 924 | 51.00 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 954 | 51.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |