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Os12g0406100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase, family 43 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0163) R2 : 0.766
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.64 (0.0425) R2dC : 0.768 R2C : 0.764
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0535 (0.0343) R2dN8 : 0.00161 R2N8 : -0.00186
σ : 0.308
deviance : 43.27
__
_____
C
peak time of C : 6.88
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.51 0.292 12.2 0.0322 1.88 -0.441 0.216 0.396 0.0437 7.09 80.09 748 -- --
38.47 0.289 12.2 0.0474 1.85 -0.45 0.378 -- 0.0484 7.1 78.98 782 -- --
38.29 0.288 12.2 0.0108 1.89 -0.49 -- 0.528 0.0479 7.12 79 782 -- --
38.87 0.29 12.2 0.0441 1.87 -0.477 -- -- 0.0515 7.12 78.72 782 -- --
115.22 0.5 12.3 0.182 -- 1.21 -- 0.358 0.138 -- 73.48 539 -- --
42.69 0.306 12.2 0.0782 1.64 -- 0.391 -- 0.064 6.89 -- -- -- --
43.08 0.307 12.2 0.0851 1.64 -- -- -- 0.063 6.88 -- -- -- --
115.47 0.5 12.3 0.206 -- 1.22 -- -- 0.144 -- 73.2 538 -- --
38.93 0.291 12.2 -- 1.87 -0.47 -- -- 0.0449 7.11 78.84 782 -- --
183.79 0.633 12.3 0.12 -- -- -- -- 0.0941 -- -- -- -- --
43.27 0.308 12.2 -- 1.64 -- -- -- 0.0535 6.88 -- -- -- --
116.58 0.503 12.3 -- -- 1.21 -- -- 0.121 -- 73.11 538 -- --
184.17 0.633 12.3 -- -- -- -- -- 0.0808 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.45 temperature 10.0 270 > th dose dependent rect. 21 12
3 37.04 humidity 70.0 10 > th dose dependent rect. 6 22
8 37.44 temperature 20.0 720 > th dose independent rect. 21 4
9 37.45 humidity 80.0 720 < th dose independent rect. 17 21
17 37.59 humidity 80.0 14400 > th dose independent rect. 4 2
19 37.59 humidity 50.0 720 > th dose dependent rect. 21 4
23 37.63 humidity 80.0 14400 < th dose dependent rect. 4 3
26 37.66 humidity 80.0 14400 < th dose independent rect. 3 4
30 37.68 temperature 20.0 270 > th dose independent rect. 21 12
31 37.69 humidity 80.0 14400 < th dose independent rect. 3 2
66 37.87 humidity 80.0 14400 < th dose independent rect. 23 10
79 37.94 humidity 80.0 14400 < th dose independent rect. 23 1
82 37.94 humidity 80.0 14400 < th dose independent rect. 23 8
85 37.95 temperature 20.0 720 > th dose independent rect. 22 1
95 37.99 humidity 80.0 720 > th dose independent rect. 5 20
109 38.03 humidity 50.0 720 > th dose dependent rect. 19 6
115 38.05 radiation 1.0 720 > th dose independent rect. 9 6
121 38.07 humidity 80.0 1440 < th dose independent rect. 24 14
152 38.15 humidity 80.0 1440 < th dose independent rect. 11 2
162 38.17 humidity 80.0 720 < th dose dependent rect. 19 13
168 38.19 temperature 30.0 90 < th dose independent rect. 3 10
170 38.19 temperature 10.0 720 > th dose dependent rect. 22 3
179 38.22 humidity 80.0 1440 > th dose independent rect. 24 15
184 38.23 temperature 20.0 270 > th dose independent rect. 4 22
198 38.26 humidity 80.0 1440 > th dose independent rect. 11 2
209 38.27 humidity 80.0 720 < th dose dependent rect. 19 8
216 38.28 temperature 25.0 270 < th dose independent rect. 23 12
221 38.29 temperature 25.0 270 < th dose independent sin 7 NA
222 38.29 humidity 80.0 1440 > th dose independent rect. 10 4
225 38.29 temperature 25.0 270 > th dose dependent rect. 9 1
227 38.29 temperature 10.0 90 > th dose dependent rect. 6 21
264 38.34 temperature 25.0 270 < th dose independent rect. 22 19
265 38.34 humidity 80.0 720 > th dose independent rect. 11 21
267 38.34 temperature 15.0 90 > th dose dependent sin 7 NA
273 38.35 humidity 80.0 720 < th dose independent rect. 10 21
293 38.39 humidity 80.0 720 < th dose independent rect. 10 18
301 38.40 temperature 25.0 270 < th dose independent rect. 23 16
312 38.41 wind 9.0 720 < th dose dependent rect. 5 4
326 38.42 humidity 80.0 720 > th dose independent rect. 19 21
329 38.43 wind 1.0 14400 < th dose independent rect. 20 3
348 38.44 temperature 30.0 270 < th dose dependent rect. 23 14
349 38.45 humidity 80.0 720 > th dose independent rect. 11 14
352 38.45 temperature 20.0 270 > th dose dependent rect. 5 4
358 38.46 humidity 80.0 720 > th dose independent rect. 17 22
370 38.47 temperature 30.0 90 < th dose dependent rect. 3 10
391 38.50 atmosphere 1000.0 720 > th dose independent rect. 9 4
419 38.52 temperature 10.0 10 > th dose dependent rect. 6 22
425 38.53 humidity 80.0 10 > th dose independent rect. 6 22
429 38.54 humidity 80.0 720 < th dose independent rect. 17 10
430 38.54 precipitation 0.1 720 < th dose independent rect. 1 20
433 38.54 precipitation 0.1 720 < th dose dependent rect. 1 20
434 38.55 humidity 80.0 1440 < th dose independent sin 4 NA
481 38.58 humidity 70.0 720 > th dose dependent rect. 5 20
487 38.59 humidity 80.0 10 < th dose independent rect. 10 22
489 38.60 humidity 80.0 720 > th dose independent no NA NA
496 38.60 humidity 80.0 720 < th dose independent rect. 23 23
518 38.62 humidity 90.0 720 < th dose dependent rect. 19 2
524 38.63 precipitation 0.1 270 < th dose independent rect. 17 12
535 38.63 precipitation 0.1 270 < th dose dependent rect. 17 12
541 38.64 humidity 80.0 720 < th dose independent rect. 17 14
554 38.64 humidity 50.0 90 > th dose dependent rect. 13 14
561 38.65 temperature 20.0 270 > th dose dependent rect. 7 1
562 38.65 humidity 70.0 720 > th dose dependent rect. 22 1
577 38.66 radiation 40.0 90 < th dose dependent rect. 13 14
580 38.67 temperature 20.0 10 > th dose independent rect. 23 11
600 38.69 humidity 60.0 14400 > th dose independent rect. 4 3
602 38.69 humidity 80.0 720 > th dose independent rect. 19 6
608 38.69 precipitation 0.1 14400 > th dose dependent rect. 15 3
637 38.70 humidity 80.0 90 > th dose dependent rect. 11 16
641 38.71 humidity 80.0 720 < th dose independent no NA NA
642 38.71 humidity 80.0 720 < th dose independent rect. 18 3
649 38.71 humidity 80.0 720 < th dose independent rect. 6 22
668 38.73 wind 5.0 720 < th dose independent rect. 5 4
678 38.73 temperature 30.0 90 < th dose dependent sin 5 NA
679 38.73 humidity 80.0 1440 > th dose dependent rect. 11 3
704 38.75 humidity 80.0 720 < th dose independent rect. 10 12
713 38.75 temperature 30.0 270 < th dose dependent sin 7 NA
718 38.76 radiation 1.0 1440 < th dose independent rect. 9 2
721 38.76 humidity 80.0 720 > th dose independent rect. 17 8
731 38.76 radiation 1.0 1440 < th dose dependent rect. 9 2
735 38.76 humidity 90.0 720 < th dose dependent rect. 18 19
743 38.77 precipitation 0.1 720 < th dose independent rect. 9 20
749 38.77 humidity 50.0 720 > th dose dependent rect. 15 10
752 38.77 precipitation 0.1 720 < th dose dependent rect. 9 20
756 38.78 temperature 30.0 270 < th dose independent rect. 1 12
772 38.79 atmosphere 1000.0 270 > th dose independent rect. 9 12
783 38.79 temperature 25.0 270 > th dose dependent rect. 17 19
799 38.81 temperature 25.0 720 < th dose independent rect. 1 4
810 38.81 radiation 1.0 1440 < th dose dependent rect. 7 9
833 38.82 humidity 70.0 720 > th dose dependent rect. 11 14
840 38.83 humidity 80.0 1440 > th dose independent sin 4 NA
844 38.83 precipitation 0.1 270 < th dose independent rect. 1 12
859 38.83 precipitation 0.1 270 < th dose dependent rect. 1 12
861 38.84 humidity 80.0 720 > th dose independent rect. 15 10
870 38.84 temperature 20.0 10 > th dose independent rect. 6 22
921 38.87 humidity 80.0 720 > th dose independent rect. 17 15
934 38.87 humidity 50.0 720 > th dose dependent rect. 15 18
960 38.89 humidity 80.0 720 > th dose independent sin 14 NA
973 38.89 wind 1.0 14400 < th dose dependent rect. 20 3
997 38.90 precipitation 0.1 14400 > th dose dependent rect. 13 5