BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0406100 Os12g0406100|AK070373
         (466 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49880.1  | chr3:18496907-18498398 FORWARD LENGTH=467          531   e-151
AT5G67540.2  | chr5:26944253-26945757 REVERSE LENGTH=472          518   e-147

>AT3G49880.1 | chr3:18496907-18498398 FORWARD LENGTH=467
          Length = 466

 Score =  531 bits (1367), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 242/375 (64%), Positives = 294/375 (78%), Gaps = 1/375 (0%)

Query: 89  KGEQKPPSVVDEFLDESSAVHDMFFPERNMAIDPIN-GGNDSMYFYYPGRVWLDTDGNPI 147
           +  + P ++V+EFLDE+S +  +FFP+   A  P     ND+ ++Y+PGR+W DT+GNPI
Sbjct: 86  RKPKTPTTLVEEFLDENSQIRHLFFPDMKSAFGPTKEDTNDTSHYYFPGRIWTDTEGNPI 145

Query: 148 QAHGGGVLYDEKTETYFWYGENKDGKTYKAHSKGADRVDIVGVSCYSSKDLWTWRNEGVV 207
           QAHGGG+L+D+ ++ Y+WYGE KDG TY +H KGA RVDI+GV CYSSKDLWTW+NEGVV
Sbjct: 146 QAHGGGILFDDISKVYYWYGEYKDGPTYLSHKKGAARVDIIGVGCYSSKDLWTWKNEGVV 205

Query: 208 LRGEKKNVTHDLHKSNVLERPKVIYNDRTGKYVMWMHIDDTNYTKASVGVAISDSPTGPF 267
           L  E+ + THDLHKSNVLERPKVIYN  TGKYVMWMHIDD NYTKASVGVAISD+PTGPF
Sbjct: 206 LAAEETDETHDLHKSNVLERPKVIYNSDTGKYVMWMHIDDANYTKASVGVAISDNPTGPF 265

Query: 268 SYLYSKQPHDCESRDMTIFKDDNGKAYLIYSSEDNSELHIGQLTDDYLDVTDNMRRLLIA 327
            YLYS+ PH  +SRDMT++KDD+  AYLIYSSEDNS LHIG LT++YLDV   M+R+++ 
Sbjct: 266 DYLYSRSPHGFDSRDMTVYKDDDNVAYLIYSSEDNSVLHIGPLTENYLDVKPVMKRIMVG 325

Query: 328 QHREAPALFKYEGTYYMITSGCTGWXXXXXXXXXXXXIMGPWETLGNPCVGGNDIFRXXX 387
           QHREAPA+FK++ TYYMITSGCTGW            IMGPWETLGNPCVGGN IFR   
Sbjct: 326 QHREAPAIFKHQNTYYMITSGCTGWAPNEALAHAAESIMGPWETLGNPCVGGNSIFRSTT 385

Query: 388 XXXXXXXVLPIPGLSGSFIFMADRWSPSELRDSRYVWLPLTVGGLPDEAADYSFMFPLWS 447
                  V+P+PG+ G FIFMADRW+P++LRDSRY+WLPL VGG  D   +YSF FP+WS
Sbjct: 386 FFAQSTFVIPLPGVPGVFIFMADRWNPADLRDSRYLWLPLIVGGPADRPLEYSFGFPMWS 445

Query: 448 RVSIYWHRRWRLPEG 462
           RVS+YWHR+WRLP  
Sbjct: 446 RVSVYWHRQWRLPSA 460



>AT5G67540.2 | chr5:26944253-26945757 REVERSE LENGTH=472
          Length = 471

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 236/370 (63%), Positives = 287/370 (77%), Gaps = 1/370 (0%)

Query: 92  QKPPSVVDEFLDESSAVHDMFFPE-RNMAIDPINGGNDSMYFYYPGRVWLDTDGNPIQAH 150
           +KP  +V+EFLD+ S +  +FFP  +  A  P     +   +Y+PG++W+DT GNPIQAH
Sbjct: 102 RKPIPLVEEFLDDKSPIRHLFFPGIKTAAFGPTKDMGNETSYYFPGKIWMDTQGNPIQAH 161

Query: 151 GGGVLYDEKTETYFWYGENKDGKTYKAHSKGADRVDIVGVSCYSSKDLWTWRNEGVVLRG 210
           GGG+L D K+ TY+WYGE KDG TY AH KG  RVDI+GV CYSSKDLWTW+NEG+VL  
Sbjct: 162 GGGILLDVKSNTYYWYGEYKDGPTYHAHKKGPARVDIIGVGCYSSKDLWTWKNEGIVLGA 221

Query: 211 EKKNVTHDLHKSNVLERPKVIYNDRTGKYVMWMHIDDTNYTKASVGVAISDSPTGPFSYL 270
           E+ N THDLHKSNVLERPKVIYN++T KYVMWMHIDD NYTKASVGVAIS+SPTGPF YL
Sbjct: 222 EETNKTHDLHKSNVLERPKVIYNEKTEKYVMWMHIDDANYTKASVGVAISNSPTGPFEYL 281

Query: 271 YSKQPHDCESRDMTIFKDDNGKAYLIYSSEDNSELHIGQLTDDYLDVTDNMRRLLIAQHR 330
           YSK+PH  +SRDMT+FKDD+G AYLIYSSE NS LHIG LT+DYLDVT  M+R+++ QHR
Sbjct: 282 YSKRPHGFDSRDMTVFKDDDGVAYLIYSSEVNSVLHIGPLTEDYLDVTPVMKRVMVGQHR 341

Query: 331 EAPALFKYEGTYYMITSGCTGWXXXXXXXXXXXXIMGPWETLGNPCVGGNDIFRXXXXXX 390
           EAPA+FK++  YYM+TS CTGW            IMGPWE LGNPC+GGN +FR      
Sbjct: 342 EAPAIFKHQNIYYMVTSWCTGWAPNEALAHAAESIMGPWEKLGNPCIGGNKVFRLTTFFA 401

Query: 391 XXXXVLPIPGLSGSFIFMADRWSPSELRDSRYVWLPLTVGGLPDEAADYSFMFPLWSRVS 450
               V+P+PG+ G+FIFMADRW+P++LRDSRYVWLPL +GG  D+  +++F FP WSRVS
Sbjct: 402 QSTYVIPLPGVPGAFIFMADRWNPADLRDSRYVWLPLVIGGPADQPLEFNFGFPSWSRVS 461

Query: 451 IYWHRRWRLP 460
           IYWH +WRLP
Sbjct: 462 IYWHSKWRLP 471



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.137    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,157,411
Number of extensions: 437103
Number of successful extensions: 777
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 774
Number of HSP's successfully gapped: 2
Length of query: 466
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 364
Effective length of database: 8,310,137
Effective search space: 3024889868
Effective search space used: 3024889868
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)